Entry |
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Name |
(GenBank) 16S rRNA pseudouridylate synthase
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KO |
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Organism |
vca Vibrio campbellii ATCC BAA-1116
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Brite |
KEGG Orthology (KO) [BR:vca00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:vca03009]
M892_00245
Enzymes [BR:vca01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
M892_00245
Ribosome biogenesis [BR:vca03009]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
M892_00245
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
I:54669..55370
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AA seq |
233 aa
MRLDKYLCDGLGATRKQATKIIKSGEITVDGEVQKSGAFKVPEGGVVEWEGREVGAPGPR
YIMLYKPADFVCSHEDGHNPTAFVLLDEPKVENLHFAGRLDVDTTGLVLITDDGQWSHRI
TSPKHKCEKTYRVWLVDAIQPDYVEKFAEGIELRNEREPTLPAHLEIVNEAENEVLLTIV
EGKYHQVKRMFAALGNKVEHLHRERIGSIVLDEALEPGDYRFLTEEEVESVVK |
NT seq |
702 nt +upstreamnt +downstreamnt
atgcgtttagataaatatttgtgtgatggactgggtgcgactcgcaagcaggcaactaag
atcatcaaaagtggcgaaataacggttgatggtgaagtacaaaagagtggtgcattcaaa
gtaccagaaggtggtgtggttgaatgggaagggcgcgaagttggtgctcctggccctcgt
tacatcatgttgtacaagcctgcggactttgtgtgttcgcatgaagatgggcacaaccca
acggcgttcgttctactggatgagccaaaggtagaaaacttgcactttgctggtcgtttg
gatgtggacactaccggtcttgtgctgatcacagacgatggtcaatggtcgcaccgtatt
acgtcaccaaaacacaaatgtgagaagacgtaccgcgtatggctagtggatgcgattcaa
cctgattacgttgagaagtttgccgaaggtattgagctacgcaacgagcgtgagccaaca
ttgccagcacatcttgagatcgtgaacgaagccgaaaacgaagtgctgctaacgattgtg
gaaggcaaataccatcaagtgaaacgtatgtttgctgcgctcggtaacaaggtagaacat
cttcaccgtgaacgtattggttctattgtgctggatgaagcacttgagccgggtgattac
cgcttcttaacagaagaagaagttgaatcagttgtaaaataa |