Vibrio campbellii ATCC BAA-1116: M892_04425
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Entry
M892_04425 CDS
T02837
Name
(GenBank) sugar-binding protein
Organism
vca
Vibrio campbellii ATCC BAA-1116
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6443
Motif
Other DBs
NCBI-ProteinID:
AGU96261
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All DBs
Position
I:971903..975595
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AA seq
1230 aa
AA seq
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MSNWTSNAFNFDSFCSGGVDQRTRSYSYQILLGSLVGNWLKGPNLDIALQFSPYSTDNLG
FGKGWKLNIPRYDLKNKQLHLANGQSYRAELGANYKLDLRYKKLLDFSVKADASGYEITY
RNGRKDILDDHGNLIKIIQSDGHALHFSWLNIGSEKRLNKVWDDRTSESQPLLLIVHVNP
GRVNIFTNIGSAHEAYFSLILNNNNLVQCNLSEDAGSYDFGYKTIGAYNLIQSVTHPCGM
LEQLAYEANGIRVNTNTYLPAVTSHRVLTRNSPIITTEYDRVNSDSRNFMGYGVQGGSLG
EGIDNLLERGFEYAYQVQKVEGGTIKTIQTYNQFHLLVTEERLVNNELVHLKTLGYPARN
NENFANQPAQYALINKEEQKWSSGEDSHLQTRHWDYDQYGNMLSFKDENNITEFYEYYSS
KGESGCPASPSGMVNFVKSRTLSNGSEERKISYEYGETTGFNNQKDVVLRLENAHDRYQS
HYSYHEDKNKAFSLGRLASIKNDIMHADGTFSKTSSYQYTLGNETVEEHEELVCHDNTKT
NVVVGHYFDIGEIAHHVDADGVRCSFEYDSLRRTKTERIDGSAARSYQYLVDTTQARQTL
VLTDCKGNLCEQSWDGQGRELEAKLGNTTTWKKEYDALGRLESKSSFDDLPDKNARSISV
TQTERYEYDDWGQVKATTLPNGNRHIAFNNLASRQKTQGIEGLALTVSNLNSWGLEDRKQ
QGDRVWHYEYDAWGRLKKETDPASQSKSYQYDKFDRAIHITQANNVAQQITYAAHTDQTQ
VTKLEIGSQIVGQRDVDGLGRPLELRRGASNQASLAWTYADSSNIPETETSLSAPTRRFT
RDDQLGVLNEKESGDQLTTYQYDPVSGLPTGSQDNNGSRSTITYSSTGLPEFEQHDGSIR
QYAYSKGGVISSIQGARDSRQFGYDELGRLVKLSTDNATVEYEYDQFDRVTEERLTSGNQ
TQITEIEWDEYSREINRAVALNDVYIFEQSQDYNELGLLRSSEKECATQGKVTETYTYDS
LSQLKRVDFSGNGPLSDWRQPIVFLEWSHDDLGNMLTQRCATNESQDFANYYYEADDPTQ
LTRITHTHPQLPSQTVLKYDQNGNMIQDAEGRELRYDHFDKLTSVLSGNTEWQYSYDSND
RLIRQHSGSESRQFEYLWSDLASIEENGSVTHYIYDDGVPKWSEQGSVVSMLATDQNGSV
IASNTAGQTGSMYRYSPYGQREQVGNTNEQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattggacttcaaatgcgtttaactttgatagtttttgttcagggggcgtagac
caaagaacaagaagctactcctatcaaattcttctcggttccttagtcggcaactggcta
aaaggccctaaccttgatatcgctctgcaattttctccctactcgacagataacctaggc
ttcggcaaaggttggaagttaaacattccaagatacgatctaaaaaataagcaactgcat
cttgcgaatggacagtcttaccgagctgaattaggtgcaaactacaaacttgatctccgc
tacaagaagctgctcgatttctccgtaaaagccgatgccagcggttatgaaattacttat
cgaaatggtcgtaaagacatcttagatgatcacggtaacctaattaaaatcattcaaagt
gatggccatgctttgcatttttcttggttaaacatcggctcagaaaaacgcctgaacaaa
gtctgggatgaccgcacatctgagagccaaccacttttgcttatcgtccacgtgaatccg
ggcagagtgaatattttcaccaacattggcagtgcacacgaagcgtatttcagccttatt
ttgaacaataataaccttgttcaatgtaacctatctgaagatgcaggtagctatgacttt
ggctacaaaacgattggggcttataacctaattcagagtgtcacccacccttgtgggatg
cttgagcaacttgcctatgaagcaaatgggatcagagtcaacaccaacacttacctccca
gcagtgacttctcatcgtgtgctgactcgaaactcgcccattattacgacggagtatgac
cgcgtaaattccgatagccgcaactttatgggctacggcgttcagggcggcagtttaggt
gaaggtatcgataaccttcttgaacgtgggttcgaatacgcataccaagtacaaaaagtg
gaaggtgggacgattaagaccattcaaacctacaaccaattccacttgctggttacagaa
gaacgcctagtaaacaatgaacttgttcacctcaagacgcttggctatcccgcgcgtaac
aatgagaattttgccaaccagccagctcagtatgccttaatcaacaaagaagagcagaag
tggtcatcgggtgaagatagccacctacaaactcgtcattgggattacgatcaatacggc
aacatgttgtctttcaaagatgaaaacaacatcactgagttttatgaatattactcgtca
aaaggggagtctggctgccctgcttcgccttctggcatggtgaactttgtgaagtctcgc
accctaagtaatggatctgaagaacgtaagatctcctatgagtacggtgaaacgactggt
ttcaacaaccaaaaggatgtcgtactgcgcttagaaaatgctcatgaccgctaccaaagc
cattacagctaccacgaggataaaaacaaggcgttttctctaggtcgtttagcatcaatc
aagaacgatatcatgcatgcagatggtaccttctcaaaaacctcaagctatcagtacacc
ttgggcaatgagacggtcgaggaacatgaagaactggtttgccacgacaacaccaaaact
aacgtcgttgtcggccattattttgatatcggcgaaatcgctcatcacgtggacgcagat
ggtgttcgctgtagctttgaatatgactcgctacgtcgtactaaaaccgaacgtattgat
ggtagtgcagcacgctcataccaatatcttgtcgacacaacccaagctagacaaactttg
gtgctgacagactgtaaaggcaacttatgcgaacagagttgggatggccaaggcagagag
ttagaagcgaaactaggcaacacaaccacttggaagaaagagtacgacgcgctcggccgc
ctagaaagcaagagctcatttgatgatcttcccgataaaaatgcacgctcgatttctgtc
actcaaaccgaaaggtatgaatacgacgattggggtcaggtgaaagccactacgctgccg
aatggcaatcgtcacattgcgtttaacaacctcgcaagccgccaaaaaacacaaggcatt
gagggcttagcgttaacagttagcaatttaaacagttggggattggaagataggaagcaa
cagggtgatcgtgtttggcattatgaatacgacgcttggggtcgactgaaaaaagaaacc
gatcctgcgagtcaatcgaaaagctatcaatacgataagtttgatcgtgcgattcatatt
actcaagctaacaatgtggctcagcagatcacctacgcagcgcatactgatcaaacacaa
gtcaccaaactagagatcggttcgcagatcgttggtcagcgtgacgtcgacgggttggga
cgacctcttgagcttcgtcgaggggcgagcaatcaagcctctttagcgtggacgtacgca
gacagcagtaatattccagaaacggaaaccagcttgtccgcgccaacaagacgttttact
cgtgatgatcaattaggtgttctcaacgagaaagaatccggcgatcagttaacgacatac
caatacgatcctgtttctggcctaccaaccggcagccaagataacaatggcagtcgcagc
acgatcacgtattcctcaacaggcctacctgagtttgaacagcatgatggaagtatccgc
caatatgcttactcaaaaggcggcgtgatttcctccattcaaggtgcgcgtgatagccgt
cagtttggctacgatgagcttggtcgattggtcaaactaagtacggataacgccactgtc
gaatacgaatacgatcagtttgatcgcgttactgaagagcgtttgacgtccggcaatcaa
acacaaatcaccgagattgaatgggatgaatacagtcgcgaaatcaatcgcgcggtggca
ctcaacgacgtttatatctttgagcagtctcaagactataacgaacttggtttgcttcgc
tctagcgaaaaagaatgtgcgacgcagggcaaggtaacggagacgtacacctatgattca
ctctcgcagctaaagcgcgtcgatttctcaggtaatggtccgctcagtgattggaggcag
cctatcgtattccttgaatggagccacgatgacctaggcaatatgttgactcaacgctgc
gcaaccaacgagtcccaagacttcgcgaattattactacgaagcggatgatccaacacag
ttaacacgcatcactcacacgcaccctcaacttcctagtcaaaccgtactgaaatatgac
cagaacggaaacatgattcaggatgccgaaggtcgagagcttcgttacgaccacttcgac
aaactcactagcgtgctgtccggcaatacagaatggcaatactcatacgacagtaatgat
cgcctaatccgacaacattctggctccgaaagtcgtcaatttgagtatttatggagtgat
ctcgcgtctatcgaagaaaatggcagcgtcactcactacatctacgatgatggcgtgccg
aaatggtcagagcaaggttctgttgtctctatgctagcaaccgatcaaaacggctctgtt
atcgcttccaacacagctggtcaaactggctcgatgtaccgctactctccatatggacaa
cgcgaacaggtgggaaataccaatgagcaataa
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