KEGG   Vibrio campbellii ATCC BAA-1116: M892_04650
Entry
M892_04650        CDS       T02837                                 
Name
(GenBank) T3SS/putative export protein VscD1
  KO
K03220  type III secretion protein D
Organism
vca  Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:vca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vca02044]
    M892_04650
Secretion system [BR:vca02044]
 Type III secretion system
  Type III secretion core apparatus
   M892_04650
SSDB
Motif
Pfam: Yop-YscD_ppl_1st Yop-YscD_ppl_2nd Yop-YscD_ppl_3rd Yop-YscD_cpl Y4YQ_C FHA DUF4131 DUF8691 DUF1122
Other DBs
NCBI-ProteinID: AGU96304
LinkDB
Position
I:complement(1014441..1015742)
AA seq 433 aa
MQQWKIRILSGVHAGVEVTLPNDSLVLGSDDFTADLVLTDSDIKASHLVLVCDGDTVLLR
DCDEVSINSESVTVDANGIELSRNALVSVGRLTFAVGHLEDDLAIDITTEAADKQAAPVS
HKPSSGWKRTVLIGLMCSLIPSVIFAGVWYSQIRASDSDAITEAEPIVLVRNILSELKLD
DVRVEWNATARQAVLEGYVEDRTAKLQLLGRIDALGINYKSDLRTMEEIRRGVRFILRNL
GYHQVKVENGEETGTLLLTGYIDDASRWSQVEQILERDVPGLVAWKVELQRAGAYMDTLK
ALLEKAELLKKVQLVTSGDRIEVRGELDDIETTRFYGVTRDFREQYGEKPYLVLKSIPKV
SKGTNIDFPFRSVNFGQVPYVILTDNVRYMVGARTPQGYRISSVTPSGIELVKGGRVITI
DLGYEGGNTNDKS
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgcagcaatggaaaattcgtattctctctggtgttcatgccggagtagaggtgacctta
cccaatgattcattggtgttggggagcgatgactttaccgccgaccttgtgttgaccgat
tcggacatcaaggcgagtcaccttgtattggtatgcgatggcgatactgtcttactgcgt
gattgtgatgaggtttcgatcaatagcgagagcgttaccgttgacgctaatgggattgaa
ttatcacgcaacgccttggtttcggttggccgattaacgtttgcggtagggcatcttgaa
gatgacttggcgatcgatatcacgacggaagccgcagataaacaagcggcaccggtcagc
cataaaccgtcatcaggttggaagagaacggtcttgatcggcttgatgtgcagcctgatc
ccaagcgtgatatttgccggtgtttggtatagccaaatccgagccagcgacagcgatgcc
atcacggaagcggagcctatcgttttagtgcgcaatattctgagcgaattgaagctcgat
gatgtgcgggttgaatggaatgccacggcaaggcaggcagtactggaagggtacgtcgag
gatagaaccgcaaaactgcaactgttgggaagaattgacgcgctagggatcaactacaaa
agtgacctgcgaaccatggaagagattcgtcgtggcgtgcgctttatcttgcgtaacctc
ggttatcaccaagtcaaagttgagaatggtgaagagaccggcacgctgctcttaacgggg
tacattgatgatgcgagccgttggagccaagtcgagcagatattagaacgcgatgtcccg
gggctggtcgcttggaaggttgaactgcaaagagcgggcgcctatatggatacgctcaaa
gccttgcttgaaaaagcagagttgctaaagaaagttcagttagtaacaagtggcgatcgt
attgaagtacgcggtgagttggacgatatcgagaccactcgcttctatggcgttacaagg
gatttccgtgagcagtatggcgagaaaccttatttggttttgaagtccattcctaaagta
agtaagggaaccaacatcgattttccgtttcgcagcgtgaatttcggccaagtcccttat
gtgattcttacggacaatgttcgttacatggttggggctcgcacccctcaagggtatcgc
atttctagcgtcaccccatcaggaatagagctggtgaaaggcgggcgagtgatcacgatc
gatctagggtatgaaggtggaaataccaatgacaaatcttga

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