KEGG   Vibrio campbellii ATCC BAA-1116: M892_04655
Entry
M892_04655        CDS       T02837                                 
Name
(GenBank) T3SS/outer membrane pore protein VscC1
  KO
K03219  type III secretion protein C
Organism
vca  Vibrio campbellii ATCC BAA-1116
Pathway
vca03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    M892_04655
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vca02044]
    M892_04655
Secretion system [BR:vca02044]
 Type III secretion system
  Type III secretion core apparatus
   M892_04655
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 FecR_C
Other DBs
NCBI-ProteinID: AGU96305
LinkDB
Position
I:complement(1015748..1017619)
AA seq 623 aa
MLAVLKKQLRRLVWSVACTLSLLSALPLHASELDWPDQPFRYYADNDSLKELLNNFGANY
RVSVSVSDKVNDRVSGRFTPEDPAEFLDYLAQVYNLMWYFDGAVLHVYKATETRSRLLQL
ELLTARELRSTLISTGVWDSRYGWRAAENKGLVYLAGPPRYVDLVVQTAEALESRLVQKS
NSTDELFVEIIPLKYASATDREITYRDQAVTVPGIASVLSRVLSGVQTQIKATKESEETD
INTAATTTKNVSVHGGASVEAEPGLNAIIVRDTQARLPLYRKLVAQLDQPQSRIEVALSI
VDISANDLSQLGVDWRAGIEVGNNSILDIKTTGDVDGGDVTLGSGQTFKSLLDATNLNYL
LAQIRLLESQGSAQVVSRPTLLTQENVEAVLNNSSTFYIKLIGRETAALEEVTYGTLLRI
VPRIVGDRFVERPEINLSLHLEDGAQIPDGGVDDVPSIRKTEISTLATVKQGQSLLIGGV
YRDEVSHQLRKVPLLGDIPYLGALFRSTTDTTRRTVRMFIIEPRIVVDGIGDNVLIGNEY
DLRPKLGTLNNISNNSAELKSALALYSCTSQVQAERHQQDLLSQGKSSLLSQCELPSGQK
GWRVQIKECDGSENHCVRPLEEQ
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgcttgccgttttaaaaaaacaactacgccgacttgtttggtctgttgcatgtactttg
agtttgttgtcggcattgcctttacacgcatcagagttggattggcctgatcagccgttt
cgttactatgccgacaacgactctttaaaagaactattgaataactttggcgctaactat
cgtgtttctgtgtcggtcagtgacaaggttaatgatcgagtcagtggtcgatttacgcct
gaagacccagccgagtttcttgattacctagcacaggtctacaacctgatgtggtatttc
gatggcgcggtgttgcatgtgtacaaagcgacggaaacccgttcacgactgctacagctt
gaacttctgacggcacgtgagctgcgcagtactctgatatcgacaggggtttgggattct
cgctacggttggcgtgcggcagagaacaaagggttggtttatttagcgggcccacctaga
tacgttgatttggttgtgcaaacggccgaagcgctggaaagccgattggttcaaaagtcg
aactctactgatgagctgtttgttgaaattattcctttgaaatatgcctcggcgacggac
agagaaatcacttatcgcgatcaagcggtgacggtgccgggcattgcatcggtattaagc
cgagtattgtcgggtgttcaaactcagatcaaagcaaccaaagagagtgaagaaacggac
atcaatacggctgcaaccacgacaaagaatgtttctgtacacggcggtgcgtcggttgaa
gcagagccaggtttaaacgccatcatagtgcgtgatacgcaagcgcgcctgcctttgtac
cgtaagttagtcgctcagttggatcagccgcagtcgcgaatcgaagtggcactctcgatt
gtcgatatcagcgcgaacgatttgagccaactgggtgtggattggcgagcgggtattgag
gtcggtaacaacagtattttggacatcaaaaccacaggtgacgtggatggtggtgatgta
acgctaggcagcgggcagacctttaagtcactgcttgatgcgaccaatttaaactacttg
ttggctcaaattcgtttgttggaatctcagggtagtgctcaagtcgtgtctcgaccgact
ttactaactcaagaaaacgttgaggcggtgttgaacaacagcagcacgttctacatcaag
ttgattggtagagaaacggcggcgcttgaagaagtgacctacggtaccttactgcgaatc
gtcccacgtattgtcggagaccgatttgttgaaagaccagaaatcaatctgagtttgcat
cttgaagatggtgcgcaaattccagatggcggtgttgatgatgtgccatccatccgcaag
acagagatcagcacgttggcgacggtgaaacaagggcagagcctactcatcggtggtgtg
taccgtgatgaagtgagtcaccaactgcgtaaagtgcctttgttaggagacatcccatac
cttggtgccttgtttagaagtaccactgataccaccagaagaacggtgcgcatgttcatt
attgagccgagaattgttgtcgatggtattggtgacaacgtgcttatcggtaatgagtat
gacttaagaccgaagctcggcaccttgaacaatatttcaaataatagtgcagagctgaaa
tcggcactcgcgctctacagctgtacatctcaagtgcaagcggagcgtcatcagcaagat
ctattgtcacagggcaaatcttcgctgttatcacaatgtgagttgccttcagggcaaaaa
ggatggcgagtgcaaatcaaagagtgtgatggctcagagaatcattgcgttcgtccatta
gaggagcaatag

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