Vibrio campbellii ATCC BAA-1116: M892_05390
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Entry
M892_05390 CDS
T02837
Name
(GenBank) exonuclease
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00540
Lipopolysaccharide biosynthesis
vca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
M892_05390
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vca01005
]
M892_05390
Lipopolysaccharide biosynthesis proteins [BR:
vca01005
]
Lipid A
M892_05390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AGU94227
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All DBs
Position
I:1174294..1175271
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AA seq
325 aa
AA seq
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MKLSKLIVLTLLSPAAIASTKSTVSFTLDNDGIFGVDQDYTNGIFLSYATEKLREDAEWS
WFTLNDNSQSNVDKIEIVLGHKMYTPSDIEADYPLVNDRPYAGYLHTEINYISLTADKAV
RYNFTIGATGESSLSEKAQEIVHGITGSTDPQGWEYQIDDEIAFSVGYRAFNKLMRSEGE
STQWEITNVNDINAGNFRSDVSQGVMFRWGTNLANSIGAANISVESPFHASMLAKSTSSW
FLFTGFEGRYRFNDITIEGDRSGIPEPSDQYDVTLQNWQASAVAGATWYNQNYGASLTFT
VKTPDYKEAQTDVYGTGSLSLFAFF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttagtaaactaatcgtccttactctgctgtctccagcagctattgcatccacc
aagtccacagtctctttcactttagataacgatggtatcttcggcgtcgaccaagattac
accaacggtattttcctttcttacgcgacagaaaaactgcgtgaagacgcagagtggagt
tggttcacacttaatgacaacagccaaagtaacgtagacaagattgaaatcgtacttggt
cacaagatgtacacaccaagtgacattgaagccgactacccgcttgttaacgatcgccct
tacgcaggctaccttcataccgaaatcaactatatctcactgactgcagataaagccgtt
cgctataacttcactatcggtgcaacaggtgaaagctcgttgtcagagaaagcacaggaa
atcgtgcacggtattactggctcaaccgacccgcaaggttgggaataccagattgatgat
gaaatcgcattcagcgtaggttaccgcgcattcaataagttgatgcgcagcgaaggtgaa
agcacgcagtgggaaatcaccaatgtaaacgacattaatgcgggtaacttccgtagtgat
gtttcacaaggtgtgatgttccgttggggtacaaacctagcaaacagcatcggtgcggca
aacatcagtgttgaaagcccattccacgcaagtatgctggctaaaagcacctctagttgg
ttcttgtttaccggattcgaaggtcgttaccgctttaatgacatcaccatcgaaggcgat
cgctctggtattcctgagccatcagatcaatacgatgttacgctacaaaactggcaagcg
agtgccgtcgcaggtgccacttggtacaaccaaaactacggcgcgagtttaacctttacc
gtcaaaacaccagactataaagaagctcaaaccgacgtttacggtactggttccctctct
ttattcgccttcttctaa
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