Vibrio campbellii ATCC BAA-1116: M892_05945
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Entry
M892_05945 CDS
T02837
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
vca
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vca03032
]
M892_05945
03036 Chromosome and associated proteins [BR:
vca03036
]
M892_05945
03400 DNA repair and recombination proteins [BR:
vca03400
]
M892_05945
DNA replication proteins [BR:
vca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M892_05945
Chromosome and associated proteins [BR:
vca03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M892_05945
DNA repair and recombination proteins [BR:
vca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M892_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
GTP_EFTU_D2
Nup214_FG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AGU94287
LinkDB
All DBs
Position
I:complement(1288311..1288583)
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AA seq
90 aa
AA seq
DB search
MNKTQLVEQIAENADISKASAGRALDAFIDAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGDEIQIAEAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaactcaactagtagaacaaatcgcagaaaacgcagacatctctaaagcatca
gctggtcgcgctctagacgcattcatcgatgcagtgagtggtacgcttcagtctggtgat
caagttgctcttgttggcttcggtacattcagcgtccgtactcgtgcagcgcgcactggc
cgcaacccaaaaactggtgatgaaatccaaatcgcggaagctaaagtaccttctttcaaa
gctggtaaagctctaaaagacgcttgtaactaa
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