Vibrio campbellii ATCC BAA-1116: M892_06725
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Entry
M892_06725 CDS
T02837
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vca03009
]
M892_06725
Enzymes [BR:
vca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
M892_06725
Ribosome biogenesis [BR:
vca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M892_06725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AGU94403
LinkDB
All DBs
Position
I:1457682..1458836
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AA seq
384 aa
AA seq
DB search
MSQDNAKRLNKYISETGFCSRREADRLIEQGRVTINGQQPEMGTKVLPGDDVCVDGSPVA
AKEKPIYIALNKPTGITCTTERDIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDGDI
VNKILRAGNNHEKEYVVRVDKPITGEFLKQMSSGVKILDTVTLPCKVEKETKFSFRIVLT
QGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLSDDEVAEILAMCEGSVGT
EEASKTDSRGRNIRKATDAKLYDSREENQGSTARRNQKTRTFLGNNADEFRHAPNSKKGQ
QRRQRDDEGGRPAKEHYKAKPQGERSRPQGEHGKSQRKPDASSNTHSANKPQSPSKPKQH
YMNPNAAKPSKPAKRNGGTLSLKK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagacaacgcaaaacgcttaaacaaatacatcagcgaaacgggcttttgctcg
cgtcgtgaagcagaccgtcttatcgagcaaggccgtgtcactattaatggtcaacaacca
gagatgggcacaaaagtactgccaggcgatgatgtgtgtgtggatggcagccctgttgca
gcgaaagaaaaaccaatttacatcgcgttgaacaaaccaaccggtatcacttgtactact
gagcgtgatattccgggtaacatcgttgatttcatcggccacaaaaagcgtatcttccct
atcggtcgtctggataaaccttccgatggtttgatcttcctaaccaacgatggcgacatc
gtaaacaagattctgcgtgcgggtaacaaccacgagaaagaatacgtagtacgtgttgac
aaaccaatcacgggtgaattcctcaagcagatgtcgagcggtgtaaagatcctcgatacg
gttactctgccttgtaaagtagagaaagagaccaaattctctttccgtatcgtactaact
caaggtctgaaccgtcagatccgtcgtatgtgtgaagcgctaggctacgaagtattcaag
ctgcgtcgcgtacgtattatgaacatctcacttgatggcattcctaacggtaaatggcgt
tacctgagtgacgacgaagtggcagagatcctagcaatgtgcgaaggctctgtgggcaca
gaagaagcatcgaaaacagattctagaggccgcaacattcgtaaagcgaccgacgcgaag
ctgtacgatagccgtgaagagaaccaaggttcaacggcgcgccgcaaccaaaaaacacgc
acgttccttggtaacaacgcggatgaattccgtcatgccccgaactcgaaaaaaggccaa
cagcgccgtcaacgtgatgatgaaggtggacgcccagcaaaagaacattacaaagcgaaa
ccacaaggtgaacgcagcagaccgcaaggcgagcatggtaaatcgcagcgtaaaccagat
gcatcaagcaatacgcactcagcaaacaaacctcaatcaccgagtaagccgaagcagcat
tacatgaacccaaatgccgcgaagccaagcaaaccagctaaacgcaatggtggtacattg
agtctgaagaagtaa
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