Vibrio campbellii ATCC BAA-1116: M892_06880
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Entry
M892_06880 CDS
T02837
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00550
Peptidoglycan biosynthesis
vca01100
Metabolic pathways
vca01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M892_06880
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M892_06880
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vca01011
]
M892_06880
Enzymes [BR:
vca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M892_06880
Peptidoglycan biosynthesis and degradation proteins [BR:
vca01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
M892_06880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AGU94428
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All DBs
Position
I:1486609..1488534
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AA seq
641 aa
AA seq
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MIRKRRSQIRDYQAEARLFSSRAIVAFLGIVILMGLLVANMYNIQVNQFQDYKTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKIKDIDSTIEALQTILEITPEQVER
FHRERKRTRRFKSVPLLTQLNENQVAVFSVNQYRFPGVEISATLKRYYPFSEVLTHVIGY
VSRINDRDMQRLIREEKDANYQATRDIGKLGIEKYYEDLLHGTAGYQEVEVNSRGRVIRT
LKYVPPIAGKDIVLNLDINLQLYVHQLLDGRRGSAVVLDPRDNGVLAMVSSPSYDPNAFV
HGISGKAYRALLNDKNRPLVNRTTLGIYPPASTIKPFIAVAALEEGVITPKTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVDIIKSIEESVDTFFYQIAYDMGIDRLSNWMMMFGFGDYT
GIDIYEESKANMPTREWKMARHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNEGA
VTAPHLLKATIDNGGDFEEQENSEYVTYPPIQNVPDKYWNMAKEGMRSVNHGTKGTARRS
FYNMDYQTGGKSGTAQVFGLGEDEEYNADEVAEHLRDHALFTGFAPFDDPEVVVSVVLEN
AGGGSSNGAPVTRKIFDRVIIGPEKIEPEEEQNNAKKEVTQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtaaacgccgcagtcaaattcgagattaccaagcagaagcgcgtctattttct
agccgcgctattgttgcatttttaggtatcgtcattttgatgggcttgctggttgccaat
atgtacaacattcaggtaaaccagtttcaagactataaaacccgctctaatgataaccgc
attaaagtggttccaatcgctcctaaccgtggtcttatctatgaccgcaacggtgtattg
ctcgcggaaaaccgtccagtcttcaacttggagctgactccagagaaaatcaaagacatc
gacagtaccattgaagcgctgcaaaccatccttgagatcacgccagaacaagttgagcgt
ttccaccgtgaacgtaagcgcactcgtcgcttcaagtctgtgccactgttaactcaattg
aatgaaaaccaagtcgctgttttctcagtgaatcaataccgttttcctggtgttgaaatc
agtgcgacattgaaacgctactacccattcagcgaagtcctgactcacgtcattggctac
gtgtcacgaatcaatgaccgcgatatgcagcgcctaatccgtgaagaaaaagacgccaac
taccaagcgacacgcgacattggtaagttaggcatcgaaaagtattacgaagacttgctg
cacggcacagcgggctaccaagaggttgaagtcaacagtcgtggtcgcgtcattcgtacc
ctgaaatacgttccgcctattgcggggaaagacatcgtcttaaaccttgatatcaaccta
caactttacgtgcaccaactgcttgatggccgacgtggtagtgctgttgtgcttgatcct
cgtgataacggcgtacttgcgatggtttcaagcccaagttacgacccgaacgcattcgta
cacggtatctccggtaaagcgtaccgcgcactactgaacgacaagaaccgtccattggtg
aaccgtacaacgctaggtatttacccgccagcttcgaccatcaaacccttcattgctgta
gcagcgctggaagaaggagtcattactccaaaaaccacacgtaatgaccctggatactgg
cgtattccaaactccgacactcgcccatttcgagattggctgcgttgggggcatggccgc
gtagacatcattaagtcgattgaagaatcggtcgatactttcttctaccaaattgcctac
gacatgggcattgatcggctatcaaattggatgatgatgtttggctttggcgattacaca
ggcatcgacatttacgaggaaagtaaggccaacatgccgactcgtgagtggaagatggct
cgtcataagacgccttggtacaagggtgacacgattccggttggtattggtcaaggttac
tggacggcaacaccaatgcagattgccaaagcaacctcagtactggtcaacgaaggtgca
gtgaccgctcctcatttattgaaagccaccatcgataatggcggtgatttcgaagagcaa
gaaaattcggaatacgtcacctacccaccgattcaaaatgtgccagacaagtactggaat
atggcgaaagaaggcatgcgttcagtaaaccatggtacgaaaggcaccgctcgtcgctct
ttctacaacatggattaccaaactggtggtaaatccggtaccgcacaggtctttggcctt
ggtgaagatgaagaatacaacgcggatgaagtcgcagagcacttacgtgaccacgccttg
tttactggctttgcaccctttgatgaccctgaagtggtggtatctgtggtgctagaaaac
gccggtggtggttcaagtaatggtgcgccagtcacgagaaagatcttcgaccgagtcatt
atcggccctgaaaaaattgaacctgaagaagagcaaaacaacgcgaagaaagaggtaacg
cagtga
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