Vibrio campbellii ATCC BAA-1116: M892_06920
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Entry
M892_06920 CDS
T02837
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00260
Glycine, serine and threonine metabolism
vca00460
Cyanoamino acid metabolism
vca00630
Glyoxylate and dicarboxylate metabolism
vca00670
One carbon pool by folate
vca00680
Methane metabolism
vca01100
Metabolic pathways
vca01110
Biosynthesis of secondary metabolites
vca01120
Microbial metabolism in diverse environments
vca01200
Carbon metabolism
vca01230
Biosynthesis of amino acids
vca01240
Biosynthesis of cofactors
vca04981
Folate transport and metabolism
Module
vca_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
M892_06920 (glyA)
09102 Energy metabolism
00680 Methane metabolism
M892_06920 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M892_06920 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
M892_06920 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
M892_06920 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
M892_06920 (glyA)
Enzymes [BR:
vca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
M892_06920 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AGU94434
LinkDB
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Position
I:complement(1497446..1498696)
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGKINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQANVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEDDAKELANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaacacttcgccaggaagaacacattgaactaatcgcttctgaaaactacacaagt
ccacgtgtaatggaagctcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagctgaagcactggcaatcgat
cgtgcatgccaactgttcggttgtgagtacgcgaacgtacagcctcactcaggttctcaa
gcaaacagcgcagtttacatggcgcttctaaacccaggcgacacagttctaggtatgagc
ctagcgcacggtggtcacctaactcacggttctccagtaaacttttctggtaagcactac
aacgtgattccttacggtatcgacgaagcaggtaaaatcaactacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttctctgcttactcacaaatc
gttgattggaaacgcatgcgtgaaatcgcagacaaagttgacgcttacctattcgtagac
atggcacacgttgctggtctaatcgcagcaggtgagtacccaacaccagttccacacgct
cacgtagtaacaacgactacgcacaaaacgctagcaggtcctcgtggcggtcttatcctt
tctaacgaaggtgaagagctttacaagaagctgaactcagcagtattccctggcggtcaa
ggtggtcctctaatgcacgttatcgctggtaaagcggtagcgttcaaagaagcgatggag
cctgaattcaaagcttaccaagctaacgtagtgaaaaacgcgaaagcaatggttggtcaa
ttccaagagcgtggctacaagatcgtttctaacggtactgagaaccacctattcctagtt
gacctaatcgacaaagacatcactggtaaagatgcagatgcagcactaggtgcagcaaac
atcacagtaaacaagaactctgttccaaacgatccacgcagcccattcgtaacgtctggt
atccgtgttggtacgccagcaattactcgtcgcggcttcactgaagatgacgcgaaagag
ctagcaaactggatgtgtgacgttctagataacatcggcaacgaagaagttatcgaagcg
acaaaacagaaagttctagaaatctgtaagcgtctaccagtttacgcgtaa
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