Vibrio campbellii ATCC BAA-1116: M892_07885
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Entry
M892_07885 CDS
T02837
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vca03009
]
M892_07885 (rluD)
Enzymes [BR:
vca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
M892_07885 (rluD)
Ribosome biogenesis [BR:
vca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M892_07885 (rluD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
DUF7055
Motif
Other DBs
NCBI-ProteinID:
AGU94555
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Position
I:complement(1711276..1712253)
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AA seq
325 aa
AA seq
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MAQQIVLTNTVKDSQLGQRLDQAIAELFADFSRSRLKEWLLAGKVQVNGEVVTKPRTRVM
GGEEITLQAELEDEERWEAQDIPLDIVYEDEDIIVINKPRDFVVHPGAGTPDGTVLNALL
HHYPDIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRNITREYEAIAIGRMT
AGGKVDKPIGRHSTKRTLMAVAPMGKPAVTHYRVAEHFREHTRIRLRLETGRTHQIRVHM
SYLQHPLLGDTAYGGRARIPTGASEELTEMIRGFDRQALHAVMLRFDHPVTGEELEFHAP
VPDDMVEMTEALRKDTEEFGLPDEF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagattgttttaaccaacaccgtaaaagatagccaattaggtcaacgttta
gaccaagctatcgccgaattattcgcggacttctctcgctctcgcttgaaagagtggttg
cttgcagggaaagtacaagtgaatggtgaagttgtcactaaacctcgcaccagagtaatg
ggtggcgaggaaattaccttgcaagccgagctggaagatgaagaacgctgggaagcacaa
gatatcccgctagatatcgtctacgaagatgaagacatcatcgtaatcaataagcctcgt
gattttgtagtacaccctggcgcgggtacgccagacggcacagtactaaacgcattgctg
catcattacccagatatcgcagaagtacctcgtgcaggtatcgtgcaccgtctggataag
gacactacaggtctaatggtggtcgcgaaaactgttccggcacaaactcgtctagtacgc
gcgctgcaaaaacgtaacatcactcgtgagtacgaagcgattgcaatcggtcgtatgacg
gcgggcggtaaagtggataaaccaattggtcgtcactctactaaacgtacgctaatggca
gttgctccaatgggtaaacctgcggtaacgcactaccgtgttgcggagcacttccgtgaa
cacacgcgtatccgtcttcgcctagaaaccggtcgtacgcaccaaatccgtgttcatatg
tcttacctacagcatccgctactaggtgatactgcatacggtggccgtgctcgtatccca
actggcgcttcagaagaactaacggaaatgatccgtggttttgaccgccaagcactgcac
gcggtaatgctgcgtttcgatcaccctgttactggtgaagagctagagtttcacgctcca
gtaccggatgacatggtagaaatgacagaagcgctacgtaaagatacagaagagttcggt
ctgcctgacgagttctaa
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