Vibrio campbellii ATCC BAA-1116: M892_08325
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Entry
M892_08325 CDS
T02837
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00220
Arginine biosynthesis
vca00240
Pyrimidine metabolism
vca00250
Alanine, aspartate and glutamate metabolism
vca01100
Metabolic pathways
vca01110
Biosynthesis of secondary metabolites
vca01240
Biosynthesis of cofactors
Module
vca_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
M892_08325 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M892_08325 (carB)
00220 Arginine biosynthesis
M892_08325 (carB)
Enzymes [BR:
vca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
M892_08325 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AGU94628
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Position
I:complement(1815744..1818977)
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AA seq
1077 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRAILVNSNPATIMTDPDM
ADATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYAVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAKG
FAGLNKEELNKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSDT
AYMYSSYDDECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSREIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLMNTQFAVKNNQVYLIE
VNPRAARTVPFVSKATGAPIAKIAARVMAGQSLEAQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGNIYPEGGRALLSVRAGDKERVVDLA
SKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSTVTSVQELHAKVKASLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagtattcttattcttggtgctggtccgattgttatc
ggtcaggcatgtgagtttgactactctggcgcacaagcgtgtaaagcactgcgtgaagag
ggttaccgagctatcctagtaaactctaaccctgcaaccatcatgactgacccagacatg
gcggatgcaacttacatcgagccaatccaatgggaagtggttcgcaacatcatcgcgaaa
gaaaagccggatgcagtactaccaacaatgggtggtcaaactgcattgaactgtgcacta
gacctagagaagcacggtgttcttgaagagttcggcgttgagatgattggtgcgactgct
gacgcaatcgacaaagcggaagaccgttctcgtttcgataaagcgatgaagtctatcggc
cttgagtgcccacgtgcagatactgcaaaaacgatggaagaagcttacgctgtactcgat
atggttggcttcccttgtatcatccgtccatcatttactatgggtggtactggtggcggt
atcgcatacaacaaagaagagttcgaagaaatctgtcgtcgtggtttggacctatctcca
accaacgaacttcttatcgatgaatctcttatcggttggaaagagtacgagatggaagtg
gttcgtgacaaagcggacaactgtatcatcgtatgtgcgattgaaaactttgacccaatg
ggcatccacacgggtgactcaatcacagtggcaccagcgcaaacactaacagacaaagaa
taccagctaatgcgcaacgcatctctagcagtattgcgtgagattggcgttgaaactggt
ggttctaacgtacagtttggtatcaacccgaaagatggccgcatggttatcatcgagatg
aacccacgcgtatctcgctcttctgctctagcatcgaaagcaacaggtttcccaatcgct
aagattgcagcgaaactggcagttggctttacgctagacgagctaatgaacgacatcact
ggcggcgctacgccagcatcattcgaaccaacaatcgactacgtagtaacaaagattcct
cgctttaatttcgagaaatttgctggtgctaacgaccgtctaacgacgcaaatgaagtca
gttggtgaggtaatggcaattggtcgtaaccaacaagagtcactacaaaaagcacttcgc
ggtctagaagtaggcgctactggttttgacgagatggttgacctagatgcgccagacgca
ctgacgaaaatccgtcatgagctgaaagaagcaggcgcagagcgtatttggtacatcgcg
gatgcattccgtgcaggtatgtcagtagatggcgtattcaacctaacgcaaatcgaccgt
tggttcttagttcaaatcgaagacatcgtgaagcttgagcaagagctaaaagcaaaaggc
ttcgctggtctaaacaaagaagaacttaacaagctgaagcgcaaaggttttgctgatgca
cgtctatctaagattctaggtgttgcggaaagcgaaatccgtcgtctacgtgaccagtac
gacatccacccagtgtacaagcgcgttgatacgtgtgcggctgagttctcttctgatacg
gcttacatgtactcatcttacgatgacgagtgtgaagcgaacccaacagacaaagacaag
atcatgatcctaggcggcggtccaaaccgtatcggtcaaggtatcgaatttgactactgt
tgtgtacacgcatcgctagcactgcgtgaagatggctacgaaactatcatggttaactgt
aaccctgagactgtttctacggactacgacacgtctgaccgtctgtacttcgaaccagta
acactggaagacgtactagcaatcgctcgtgttgagaagccaaaaggcgttatcgttcag
tacggtggtcaaacaccacttaaactggctcgcgcacttgaagcggctggcgtgccaatc
atcggtactagcccagatgcaatcgaccgtgcagaagaccgtgagcgtttccaagttgct
gttgaccgtctaggtcttctacagccagaaaacgcgacagtaacgacgatggagcaagcg
gtagagaaatctcgtgaaataggttacccactggttgtacgtccttcttacgtacttggt
ggtcgtgcgatggaaatcgtatacgatgagcaagacctacgtcgctacttcaacgaagct
gtcagcgtatcaaacgaatctccagttctactagatagcttcctagacgacgcagttgaa
gtcgatatcgatgctatctgtgacggtgagcgtgtggttatcggcggtatcatggagcac
atcgaacaagcgggtgttcactctggtgactcagcatgttctcttcctgcatacacgcta
agtcaagaaatccaagacgtaatgcgcgagcaagttgaaaagctagcgtttgagttgggt
gttcgtggtctgatgaacacgcagtttgcggttaagaacaaccaagtatacctaatcgag
gtgaaccctcgtgcagcgcgtacagtaccgttcgtatctaaagcaacgggtgcaccaatc
gctaagattgctgcgcgtgtaatggcgggtcaatcgcttgaagctcaaggctttacgaaa
gaaattatcccaccttactactcagtgaaagaagtggtacttccattcaacaagttccct
ggtgttgacccactgttaggcccagaaatgcgctctactggtgaggttatgggtgttggt
gctacgtttgcagaagcttacgcgaaagcagaattgggttgtggcaacatttacccagaa
ggtggtcgtgcactactgtctgttcgtgcaggtgacaaagagcgcgttgtggacctagca
tctaagttgacaaaacttggttaccagctagatgcaacacacggtacagcagtgattctt
ggtgaagcgggtattaacccacgtctagtaaacaaagtacacgaaggtcgtcctcacatt
cttgaccgtattaagaacaacgagtacacctacatcgtgaatactgccgctggccgtcaa
gcgattgaagactctaaagttctgcgtcgcggcgcactagctgagaaagtgaactacacg
acaacactaaacgctgcattcgcaacttgtatggcacacactgcagacgcgaagagcaca
gtaacttcggttcaagagctacacgcaaaagtgaaagctagcctagaagcgtaa
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