KEGG   Vibrio campbellii ATCC BAA-1116: M892_09830
Entry
M892_09830        CDS       T02837                                 
Name
(GenBank) T2SS/secreton-dependent pathway protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vca  Vibrio campbellii ATCC BAA-1116
Pathway
vca03070  Bacterial secretion system
vca05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    M892_09830
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    M892_09830
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vca02044]
    M892_09830
Secretion system [BR:vca02044]
 Type II secretion system
  General secretion pathway protein
   M892_09830
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 DUF4264
Other DBs
NCBI-ProteinID: AGU96619
LinkDB
Position
I:complement(2135699..2137741)
AA seq 680 aa
MKHWFSKSTWLLAGTLLCAPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEKQYYSFFLNVLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVLGDDSAQG
DSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDKEIEVVELRNASASEMVRIVDALNKTTNQKSTPEFLEPKIVADDRTNSILISG
DPKVRARLKRLIRQLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQNGA
SSAQRGEVVIAAHEATNSLVLTAQPDIMMALQDVISQLDIRRAQVLIEALIVEMSEGDGI
NLGVQWGNLDTGAVIQYGNTGAQIGNVMVGLEEAKDTTKTESYWDEDANGGSGDWNTREY
IEEGDYSTLAAALGGVNGAAMSIMMGDWTALITAVSSDSNSNILSSPSITVMDNGEASFI
VGEEVPVITGSTSGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLTIEQEVSNVLGAN
GAVDVRFAKRQLNTSVMIQDGQMLVLGGLVDERALESESKVPLLGDIPVIGQLFKSTSTQ
TEKRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAQEGLKLMDDSKVPLMPEFGE
ERKHPAEIQAFIDQMVKNDG
NT seq 2043 nt   +upstreamnt  +downstreamnt
gtgaaacattggtttagcaaaagtacttggttacttgcagggacactactctgcgctccg
ggtgcaatggcgaacgagtttagtgccagcttcaaaggcactgatattcaagaattcatc
aatattgttggtcgcaatctagagaagaccatcatcgttgacccgtctgtgcgcggtaag
attgacgtacgtagttacgacgttcttaacgaaaagcagtactacagcttcttcttgaac
gttcttgaagtgtatggttatgccgttgtcgaaatggacaatggtgtgttgaaagtcatc
aaagcgaaagattcaaaaacgtcagcaatcccggttttgggtgatgacagtgcgcaaggc
gacagcgtgattacccgtgtggttgcggtgcgtaatgtgtcggttcgtgaactttctccg
ctactgcgtcaactgattgataacgcaggtgccggtaacgtggtgcactacgatccagct
aacatcatcttgatcacgggtcgtgctgcggtagtaaaccgcctagcggaaatcattaag
cgcgttgaccaagcgggtgacaaagaaatcgaagtcgtagagctgcgcaatgcgtctgct
tctgagatggtgcgtatcgttgatgccctgaacaaaacgaccaaccaaaagagcacacct
gaattcctagagccaaaaatcgtagcggatgatcgtactaactccatcctgatttctggt
gatcctaaagttcgtgcgcgcctgaagcgtttgattcgtcaacttgacgttgaaatggcg
accaaaggcaataaccgcgtggtttacctaaagtacgcgaaagcggaagacctagttgat
gtactaaaaggcgtatctgacaacttacaggctgagaagcaagcaggtcaaaacggcgca
tcaagtgcacagcgtggtgaagtggtgattgccgctcacgaagcaaccaactcgctcgtt
ttgactgcgcagccagatatcatgatggcgctacaagacgtgatttctcaactggatatc
cgtcgtgcacaagttctgattgaagcgttgatcgttgaaatgtctgaaggcgacggcatc
aaccttggcgttcaatggggtaacttagatacaggtgcggtaatccaatacggcaacact
ggcgcacaaatcggtaatgtcatggttggtcttgaagaagcgaaagatacaacgaagact
gagagctattgggatgaagatgctaatggcggaagtggtgattggaatactcgtgaatat
atcgaagaaggtgattactcgacactagccgctgcacttggtggtgttaatggtgcagca
atgagcatcatgatgggtgactggactgcattgattactgctgtgtcatcggattcaaac
tcaaacatcctatcttctccaagcattacagtgatggataatggcgaagcgtccttcatc
gttggtgaagaagtgcctgtgattacaggctcgacatccgggtcgaataacgacaaccca
ttccaaacggttgaccgtaaagaagtcggtatcaaacttaaagttgtgcctcaaatcaac
gaaggtgactcagtacaactgactattgagcaggaagtgtcaaacgttctgggtgcaaat
ggtgcggtggacgtgcgtttcgcgaagcgtcagttgaatacctctgtgatgattcaagat
ggtcagatgctagttctgggcggtttggttgatgagcgtgcgttagaaagtgaatcgaaa
gtgccgctactgggtgatattcctgtcattggtcaactgttcaagtcgactagcacgcaa
acagaaaaacgtaacctgatggtgtttatcaagccaaccatcatccgcgatggtatgacg
gctgatggtatcactcagcgtaagtacaacttcattcgtgcagagcagctttataaagcg
caagaaggcttgaagctgatggatgattcaaaagttccactaatgcctgaatttggtgaa
gagcgtaaacaccctgctgaaattcaagcgttcatcgatcagatggtaaagaatgatggt
tga

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