Vibrio campbellii ATCC BAA-1116: M892_10455
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Entry
M892_10455 CDS
T02837
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00071
Fatty acid degradation
vca00280
Valine, leucine and isoleucine degradation
vca00310
Lysine degradation
vca00362
Benzoate degradation
vca00380
Tryptophan metabolism
vca00410
beta-Alanine metabolism
vca00640
Propanoate metabolism
vca00650
Butanoate metabolism
vca00907
Pinene, camphor and geraniol degradation
vca00930
Caprolactam degradation
vca01100
Metabolic pathways
vca01110
Biosynthesis of secondary metabolites
vca01120
Microbial metabolism in diverse environments
vca01200
Carbon metabolism
vca01212
Fatty acid metabolism
Module
vca_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M892_10455 (fadB)
00650 Butanoate metabolism
M892_10455 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
M892_10455 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M892_10455 (fadB)
00310 Lysine degradation
M892_10455 (fadB)
00380 Tryptophan metabolism
M892_10455 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M892_10455 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M892_10455 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M892_10455 (fadB)
00930 Caprolactam degradation
M892_10455 (fadB)
Enzymes [BR:
vca01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M892_10455 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M892_10455 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M892_10455 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
M892_10455 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
AGU94924
LinkDB
All DBs
Position
I:2277458..2279629
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEVQDGIAELSFCSPKSVNKLDLATLESLDKALDALKAHQGLKGLMLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEVITQGKACRADEALK
IGLLDAVVDSDALYESALKTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GLAKKSAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYTGIEESDVIVEAVVENPKVKAAVLSEVESHVG
EDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKQGRDAIDALFEASKYGQKNGSGFYSYTIDRKGK
PKKTFSEEILPVLADVCTDKQDFDDQTIIQRMMIPMINEVVLCLQEGIIATPQEADMTLV
YGLGFPPFRGGVFRYLDSVGIAEFVAMAKQYSELGAMYQVPQMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaagtacaagatggtattgcagaacta
agcttctgctctccaaaatccgttaacaagctcgacctagcgacactagagtcactcgac
aaagcccttgatgcactaaaagcgcaccaaggactgaagggcttgatgctcacctcagat
aaagacgcgttcattgttggcgctgatatcaccgaattcttaggtcttttcgctaagaca
gacgctgaactcgatcagtggctgcaatttgctaacagcatctttaacaagctggaagac
ttaccggttccgactatctcggtactaaaaggtcacacgttaggtggcggttgtgagtgc
gtgcttgccactgacatgcgaattggtgacaagaccaccagcatcggtctaccagagaca
aaactgggcatcatgccgggctttggtggttgtgtgcgtctgccacgtgttattggcgcc
gacagtgcgatggaagtgatcacacaaggcaaagcgtgtcgtgcggatgaggcattaaag
attggtcttctggatgcggttgtcgatagcgacgcactttacgaatcagcactcaagaca
ctgacctcggcaatcaacgagaagttggactggcaagctcgtcgtaagcaaaagacatcg
ccattgacgctaagtaagctcgaatcaatgatgagctttaccatggcgaagggtctagtg
gcacaaaaagcaggtcctcactaccctgctccaatgacagccgttattactattgaagaa
ggtgctcgctttgctcgtaacgaagcactcgacattgaacgtaagcacttcgtaaaactg
gctaagtctgaagaagcaaaatcactggttggtttattcctcaacgaccaatacatcaaa
gggcttgcgaaaaaatcagctaagtcagcgagtaaagacacgcaacgtgcagctgtactt
ggtgcgggcattatgggcggcggcatcgcctaccaatctgcattaaaaggcgtaccagtg
ttaatgaaagacatcgcgcaaccttcactcgatttaggcatgactgaagcatctaagctg
ctaaataaacgcttatctcgtggtcgcattgatggctttaagatggctggtattttagcg
tctatcacaccaagcctacattacacaggcatcgaagaatcagacgtgattgttgaagcc
gtagtagaaaacccgaaagtaaaagcagcagttttgagtgaagtggaatcacatgtcggt
gaagacacggttatcacctcaaacacctcgacgattccaatcaatctattagcgaaatcg
ctaaaacgcccagaaaacttctgtggcatgcacttcttcaacccagtgcaccgcatgcct
cttgttgagatcatccgtggtgaacatacctctgatgaaaccatcaaccgtgttgttgcg
tacgcagcgaaaatgggtaaatcaccaattgtcgttaatgactgccctgggttctttgta
aaccgcgtgttgttcccatactttggtggcttcagcatgctacttcgagacggtgctgac
tttacgaaaatcgacaaaatcatggaacgtaagtttggctggccgatgggacctgcatac
ttgctcgatgttgttggtattgatactgctcaccacgcacaagccgttatggcgcaaggt
ttcccagagcgtatgggcaaacaaggtcgtgatgcgatcgatgcactgttcgaagcaagc
aaatacggtcagaagaatggcagtggcttctacagctacaccatagatagaaaaggtaag
ccgaagaaaaccttctctgaagagatcttgccggtgctcgctgacgtttgtaccgataag
caggactttgacgatcaaaccatcattcaacgtatgatgattccaatgatcaacgaagtg
gtattgtgtctacaagaaggcatcattgccactccacaagaagcggatatgacattggtt
tacggtcttggtttccctccattccgcggcggcgtattccgctacctagatagcgtaggt
attgctgagtttgttgcaatggcaaaacaatactcagagcttggtgctatgtaccaagta
ccgcagatgctgattgatatggcggcgaaaggtgaaagcttttacggtgcacaacagcaa
ggttctatctaa
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