Vibrio campbellii ATCC BAA-1116: M892_11145
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Entry
M892_11145 CDS
T02837
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00300
Lysine biosynthesis
vca00470
D-Amino acid metabolism
vca01100
Metabolic pathways
vca01110
Biosynthesis of secondary metabolites
vca01120
Microbial metabolism in diverse environments
vca01230
Biosynthesis of amino acids
Module
vca_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M892_11145 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M892_11145 (dapF)
Enzymes [BR:
vca01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M892_11145 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGU95031
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All DBs
Position
I:2422832..2423662
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNRYSISVSTKKGKMILDVEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDKTLFCGAVSMGNPHVVTVVDDVDTAEVETLGPL
LESHERFPERVNAGFMQVVNRNHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDENV
KVSLPGGDLRISWQGPGKPLFMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccacttttccaaaatgcacggtttgggcaacgactttatggtcgtcgactgc
attacccagaacgtgtttttctcgcaagatttgatccgtcgtttggcggatcgtcacacg
ggcgtcggttttgaccaattgctcgtggttgaagcgccttatgatccagaaaccgatttc
cactaccgcatttttaatgccgatggtagtgaagttgagcagtgtggtaatggcgctcgc
tgtttcgcgcgtttcgtccgtttgaaaggtttgacgaataggtacagcatcagcgttagc
accaagaaaggtaagatgattcttgatgttgaagatgatggtgaagtcacggtgaacatg
ggcgtacctgaattcgagccgaacaagatccctttcaaagcgaagcagaaagagaaaacc
tacatcatgcgtgcaggcgataagaccctgttctgtggcgcagtgagcatgggtaacccg
cacgtggtgactgtggtcgacgatgtggatacggcagaagtggaaacactcggaccgcta
ttagaatcacacgaacgcttccctgagcgtgtgaacgcgggctttatgcaagttgtgaat
cgcaatcacatccgcctacgcgtgtatgagcgtggtgcgggtgaaacacaagcttgcggc
agcggtgcctgtggcgcagttgcggtgggcatcctgcaaggtctattggatgaaaacgtg
aaagtttcacttcctggtggtgacctacgcatatcttggcaaggtccaggcaaaccattg
tttatgaccggtccagcaactcacgtatttgatggtcaattgtcgtgctag
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