KEGG   Vibrio campbellii ATCC BAA-1116: M892_11145
Entry
M892_11145        CDS       T02837                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vca  Vibrio campbellii ATCC BAA-1116
Pathway
vca00300  Lysine biosynthesis
vca00470  D-Amino acid metabolism
vca01100  Metabolic pathways
vca01110  Biosynthesis of secondary metabolites
vca01120  Microbial metabolism in diverse environments
vca01230  Biosynthesis of amino acids
Module
vca_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vca00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    M892_11145 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    M892_11145 (dapF)
Enzymes [BR:vca01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     M892_11145 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AGU95031
LinkDB
Position
I:2422832..2423662
AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNRYSISVSTKKGKMILDVEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDKTLFCGAVSMGNPHVVTVVDDVDTAEVETLGPL
LESHERFPERVNAGFMQVVNRNHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDENV
KVSLPGGDLRISWQGPGKPLFMTGPATHVFDGQLSC
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcatttccacttttccaaaatgcacggtttgggcaacgactttatggtcgtcgactgc
attacccagaacgtgtttttctcgcaagatttgatccgtcgtttggcggatcgtcacacg
ggcgtcggttttgaccaattgctcgtggttgaagcgccttatgatccagaaaccgatttc
cactaccgcatttttaatgccgatggtagtgaagttgagcagtgtggtaatggcgctcgc
tgtttcgcgcgtttcgtccgtttgaaaggtttgacgaataggtacagcatcagcgttagc
accaagaaaggtaagatgattcttgatgttgaagatgatggtgaagtcacggtgaacatg
ggcgtacctgaattcgagccgaacaagatccctttcaaagcgaagcagaaagagaaaacc
tacatcatgcgtgcaggcgataagaccctgttctgtggcgcagtgagcatgggtaacccg
cacgtggtgactgtggtcgacgatgtggatacggcagaagtggaaacactcggaccgcta
ttagaatcacacgaacgcttccctgagcgtgtgaacgcgggctttatgcaagttgtgaat
cgcaatcacatccgcctacgcgtgtatgagcgtggtgcgggtgaaacacaagcttgcggc
agcggtgcctgtggcgcagttgcggtgggcatcctgcaaggtctattggatgaaaacgtg
aaagtttcacttcctggtggtgacctacgcatatcttggcaaggtccaggcaaaccattg
tttatgaccggtccagcaactcacgtatttgatggtcaattgtcgtgctag

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