Vibrio campbellii ATCC BAA-1116: M892_12235
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Entry
M892_12235 CDS
T02837
Name
(GenBank) transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca02020
Two-component system
vca02024
Quorum sensing
vca05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M892_12235
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M892_12235
05111 Biofilm formation - Vibrio cholerae
M892_12235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vca03000
]
M892_12235
Transcription factors [BR:
vca03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
M892_12235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
MarR_2
RepL
HTH_24
HTH_23
MarR
Pil1
Sigma70_r4
HTH_11
Exonuc_VII_L
HTH_ParB
HTH_28
bAvd
HTH_7
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AGU95167
LinkDB
All DBs
Position
I:complement(2644070..2644702)
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEDQERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQ
MARRLQVTSQKVGDLAFLDVTDRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttctaggtaaacctcaaaccgacccaacattagagtggtttctttcacactgtcat
attcataagtacccatcaaagagcacgctaattcacgcgggcgaaaaagcagagactttg
tactacatcgttaaaggttctgttgcggttcttatcaaagacgaagaaggtaaggaaatg
atcctttcttacctaaaccaaggcgacttcattggtgagcttggtctattcgaagaagac
caagagcgtacagcttgggttcgcgctaaatctccttgtgaagtggcagagatttctttc
aagaaattccgtcaacttatccaagttaacccagacatcctaatgcgcctttctgcgcaa
atggctcgtcgtctacaagttactagccaaaaagtgggtgacctagcgttcctagacgta
actgatcgtatcgctcagactcttctgaaccttgctaaacagccagatgcgatgacgcac
ccagacggcatgcaaatcaagatcactcgtcaagaaatcggtcaaattgttggctgttct
cgtgagacagtaggccgtatcttgaagatgctagaagagcagaacctaatttctgcgcac
ggtaaaactatcgttgtttacgggactcgttaa
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