Vibrio campbellii ATCC BAA-1116: M892_12395
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Entry
M892_12395 CDS
T02837
Name
(GenBank) transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca02024
Quorum sensing
vca05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M892_12395
05111 Biofilm formation - Vibrio cholerae
M892_12395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vca03000
]
M892_12395
Transcription factors [BR:
vca03000
]
Prokaryotic type
Helix-turn-helix
PadR family
M892_12395
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AGU95193
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All DBs
Position
I:complement(2671456..2672061)
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AA seq
201 aa
AA seq
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MKNANESVDSLFTSLLTIWIEDMSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQ
QVYRELNKMAEKELVTCVLEPQEGKPDRKVYSITDAGRSALGEWFDQPTAHPTVRDEFSA
KLMACAVQPAAPFRDQLSELVEESRKLVAHYKEIEAAYYATPSTLDKQARLERLTLRRNL
MLREAWINWAEEVLTELEVIG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgcaaatgaaagtgtagatagcttgtttacaagtttattgaccatttggatt
gaagacatgtcattaccacacgtaattctaactgtacttagcactcgcgacgctaccggt
tacgacatcactaaagaattctcagctagcatcggttacttctggaaagcaagccaccaa
caagtttatcgtgaacttaataaaatggctgagaaagagctggttacttgcgtattagaa
cctcaagaaggcaagccagaccgtaaggtttactcaatcactgacgcaggccgtagcgca
ttgggcgagtggtttgatcagccaactgcacacccaactgtacgtgacgaattctcagcg
aagcttatggcttgtgccgtgcaacctgcagcgcctttccgtgaccagctgtctgagctt
gtagaagagtctcgtaaactggttgctcactacaaagaaatcgaagctgcgtactacgca
acgccatcaacgctagacaagcaagcgcgtctagagcgtctaacacttcgtcgtaaccta
atgctacgtgaagcgtggattaactgggcagaagaagtgctaacagaacttgaagtgatc
ggctaa
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