Vibrio campbellii ATCC BAA-1116: M892_13425
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Entry
M892_13425 CDS
T02837
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M892_13425 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vca03019
]
M892_13425 (rnc)
03009 Ribosome biogenesis [BR:
vca03009
]
M892_13425 (rnc)
03036 Chromosome and associated proteins [BR:
vca03036
]
M892_13425 (rnc)
Enzymes [BR:
vca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
M892_13425 (rnc)
Messenger RNA biogenesis [BR:
vca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M892_13425 (rnc)
Ribosome biogenesis [BR:
vca03009
]
Eukaryotic type
90S particles
RNase
M892_13425 (rnc)
Prokaryotic type
rRNA processing factors
M892_13425 (rnc)
Chromosome and associated proteins [BR:
vca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
M892_13425 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AGU95348
LinkDB
All DBs
Position
I:2890459..2891136
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AA seq
225 aa
AA seq
DB search
MNSPIDKLERKLGYQFKDAGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDIEAVRGIVLSWYNSRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVECDVAGVDKPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaattgataaactagagagaaagctcggctaccaatttaaggatgctggg
cttatcaacttggcgctgactcaccgcagcgccaacagcaagcataatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcatcgctgatgatctgtaccatcgtttcccg
aaagtgaacgaaggtgacatgagccgtatgcgcgctactttggtacgtgggcacacattg
gcggaactgggtcgtgaattcgatctaggagattatttaaaattaggtccaggtgaattg
aagagtggcggattccgccgagactctattctagccgatgcggtagaagccattattggt
gcgatttaccttgatagtgatattgaagccgtgcgcggcattgtactgagctggtacaac
tcgcgtcttgaggcgatcaagcctggcgtatcacaaaaagatccaaaaactcgcctacaa
gagttcctgcaaggcagaagaaaaccgctgcctgtctacacagtgactaatattaaaggt
gaagcgcacaaccaagagttcacggttgagtgtgacgtagcaggtgtggataagcctgta
atcggtaaaggcaccagccgccgcaaggcagaacaagcggctgcagaaacggcacttgag
caattaacgaatggctga
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