Vibrio campbellii ATCC BAA-1116: M892_13795
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Entry
M892_13795 CDS
T02837
Name
(GenBank) quorum sensing master regulator at high cell density LuxR
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca02020
Two-component system
vca02024
Quorum sensing
vca05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M892_13795
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M892_13795
05111 Biofilm formation - Vibrio cholerae
M892_13795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vca03000
]
M892_13795
Transcription factors [BR:
vca03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
M892_13795
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
Radial_spoke_3
DUF3755
TetR_C_11
HTH_7
LacI
Motif
Other DBs
NCBI-ProteinID:
AGU95396
LinkDB
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Position
I:complement(2966609..2967226)
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AA seq
205 aa
AA seq
DB search
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTR
EDLVDEVLNHVVRQFSNFLSDNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSAS
TRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHEPEHLANLFHGICYSIFVQANRS
KSEAELTNLVSAYLDMLCIYNREHH
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggactcaattgcaaagagacctcgtactaggctttcccctctaaaacgtaaacagcaa
ctgatggaaatcgctcttgaagtgtttgctcgtcgcggcattggccgtggtggtcacgcg
gatattgcagagatcgctcaagtttctgttgcgacggtatttaactacttccctactcgt
gaagatttggtggatgaagttctgaaccacgttgtgcgtcagttctctaacttcttgtcg
gataacatcgacttagacatccacgcgcgcgaaaacatcgccaacatcactaatgcaatg
attgagctagtaagccaagattgccattggctgaaagtttggtttgagtggagcgcatcg
acacgtgatgaagtatggccattattcgtgaccacaaaccgcactaaccaacttctagtg
caaaacatgttcatcaaagccatcgagcgtggtgaagtttgtgaccaacatgaaccggaa
cacttggcgaatctattccacggtatttgctactctattttcgtacaagcaaaccgctct
aagagcgaagctgagttaacgaacctagtaagcgcatacttagatatgctatgcatctac
aaccgtgaacatcactaa
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