Vibrio campbellii ATCC BAA-1116: M892_13850
Help
Entry
M892_13850 CDS
T02837
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M892_13850 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vca03019
]
M892_13850 (pcnB)
Enzymes [BR:
vca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
M892_13850 (pcnB)
Messenger RNA biogenesis [BR:
vca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M892_13850 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AGU95406
LinkDB
All DBs
Position
I:complement(2977382..2978770)
Genome browser
AA seq
462 aa
AA seq
DB search
MHMNTNDYTTSESAMIPELALNVITREEHNISRKQISDNALKVLYRLNGAGFDAFLVGGG
VRDLLLGQKPKDFDIATNATPEQIKQLFRNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQ
EQKNKNVSQQSKEGMLLRDNVYGTIDEDAERRDFTINSMYYNIADYSIHDYARGIEDLED
RLVRLIGDPETRYREDPVRMLRAIRFAVKLDFDIEEDTAAPIEEMAPLLRDIPSARLFEE
SLKMLQSGHGLETYHLLREYNLFQQLFPAIAEHFTEDYESHTEQMLDLVLDSTDMRIEEG
KRINPAFMFAAMLWYPLCAMADKLMEQHNLCHYDAIMEASNIILYDQVRTIAIPRRHTAT
IREIWQLQLRLPRRNGKRAFRLMELNKFRAGFDFLEMRGEIEGGDTQKLAKWWETFQNAG
REMRQAMAGDLDGQAPKTGQRRRKTYRKKKSKPKSCSQRTLR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgaatacaaacgactatacaacaagcgaatctgccatgatcccagaactcgct
ctcaatgtaattactcgtgaagagcacaacatttcgcgtaagcagatcagtgacaatgca
ctgaaggtgctataccgactaaacggtgccggtttcgatgcttttcttgtaggtggcggg
gttcgagacttactgcttggacaaaaaccaaaagactttgatatcgcaaccaacgcgaca
ccagaacagatcaaacagctatttagaaactgccgtttgattggccgtcgcttccgtctc
gcacacattatgtttggtcgagacatcatcgaagttgcgaccttccgtggtcaccaccaa
gagcaaaaaaacaagaacgtttctcagcagtcaaaagaaggcatgctgcttcgtgacaat
gtttacggcactattgatgaagatgcagagcgccgtgacttcacgattaactcgatgtac
tacaacatcgcagactactcaatacacgactatgcacgtggcattgaggatctagaagac
cgtcttgttcgcctgatcggtgatccagaaacccgttaccgcgaagacccagtgcgcatg
ctgcgtgcgattcgctttgctgtgaagctcgacttcgacatcgaagaagacaccgcagca
ccgattgaagagatggcaccgctgctacgcgatatcccatcggcgcgtctattcgaagaa
tcgttgaagatgcttcaatctggtcacggcctagaaacttatcacctactgcgtgaatac
aacctattccagcagcttttccctgcgattgctgaacacttcactgaagattacgaatct
cacactgagcaaatgcttgatttggtgcttgattcaaccgatatgcgtatcgaagaaggc
aaacgcatcaatccagcattcatgtttgctgccatgctgtggtacccgctatgcgcaatg
gctgacaaactgatggaacagcataacctgtgccattacgacgccatcatggaagcgagc
aacatcattctttatgaccaagtacgtaccattgcgattccacgccgtcataccgcgaca
attcgtgaaatttggcagctacaattacgtcttccacgacgcaatggcaaacgcgcattc
cgcctcatggagctcaacaaatttagagctggctttgattttcttgaaatgcgcggtgaa
attgagggtggagacactcagaagcttgccaagtggtgggaaactttccaaaatgcgggc
cgagaaatgcgccaagccatggctggcgatctcgatggccaagcgcctaaaactggccaa
cgccgccgtaaaacctatcgcaagaaaaagagtaagccgaaatcatgttcacagcgtaca
ttgcggtag
DBGET
integrated database retrieval system
