Vibrio campbellii ATCC BAA-1116: M892_13875
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Entry
M892_13875 CDS
T02837
Name
(GenBank) peptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00550
Peptidoglycan biosynthesis
vca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M892_13875
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vca01003
]
M892_13875
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vca01011
]
M892_13875
Enzymes [BR:
vca01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
M892_13875
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M892_13875
Glycosyltransferases [BR:
vca01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
M892_13875
Peptidoglycan biosynthesis and degradation proteins [BR:
vca01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
M892_13875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AGU95410
LinkDB
All DBs
Position
I:2983672..2986062
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AA seq
796 aa
AA seq
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MTDTKKPGAKRAPAKKTTSSKTTTAKKSGAKRPRKSPSKKPSNGKRSWLKTIWSFSWKAG
VALAAVLLFVGIYLDSVVKDRFDGQLFDLPTVVYARILNLSPGENITIKEMRNELDVLNY
RKVSQPRYPGEYSSSSTRIELIRRPFEFADGPEPDRHVMLHFSSSGLQRIQSLESKGDLG
YLRIEPKMLGMLEKDQNEQRLFLRRDQFPEVLVDALLATEDRDFYQHDGVSPLAIGRALV
ANIKAGRTVQGGSTLTQQLAKNLFLTRDKTLWRKVREAYIALILDYRYSKDRILEAYLNE
VYLGQSGGDAIHGFALASRYYFGQPIQELRIDQLAMLVGMVKGPSYYNPIRYPERTKTRR
DLVLRLLMQQDMLTAEQYEQAVNRPLDTQSKPRIASRQPAYFQQLNIELKEKVGDNFKAE
TGLRLFTSLDPVSQSKLEQAIAKKVPELAKRAGKDLEAAAVAVDRHSGEIRAMVGGKRVG
YEGFNRALNASRPIGSLVKPAIYLTALEQPEKYNLATTLHDTPLSLKGSKGSVWSPRNFD
RKFRGDVPLYLALANSLNVPTVRLGMELGIPEVSDTLERLGVDKSEIRPVPSMFLGSFSL
TPFEVAQMYQTVTNSGKRAKLSALRSVIDMDGNVLYQSLPRSSQAVDQQAAWLTTYAMKQ
GVAQGTGRFLQSQFAWAALAGKTGTSNDSRDSWFVGVDGREVTTVWLGRDDNKSTKLTGS
SGALRVYAEYLKQRIPERLELPWPKEVTTLGFQKAATGALEMNCRSEYKLPVWDKSGQIK
QQCEKKSNWLNSLFDW
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgactgatactaaaaagcccggtgcaaaacgagcaccagcgaagaaaacaacgtcaagt
aaaacgacaaccgctaagaaaagcggcgcgaagcgaccgagaaaatcgccatcgaaaaag
ccgagtaatggcaagcgctcttggcttaaaactatttggtcatttagctggaaggcgggt
gtcgcgttagctgcggtattgttgtttgttgggatttatctcgatagtgtggttaaagat
cgttttgacggccagttgtttgatctaccaactgtcgtttatgcgcgtatcctcaattta
agtccgggtgagaacattaccatcaaagagatgcgtaatgagcttgatgtattgaactac
cgtaaggtgagtcagcctcgttaccctggtgaatactcttcttcttcaacgcgtattgag
cttattcgtcgtccgttcgagtttgctgatggccctgagcctgatcgtcacgtcatgctg
catttttcaagcagtggtctacagcgcattcaatctttggaatccaaaggcgatcttggt
tacctgcgcattgaacctaagatgctaggaatgttggaaaaagatcagaatgaacagcgc
ctgttcttacgtcgagatcaattcccagaagtgcttgtcgatgcgctgttagcaaccgaa
gaccgtgatttttatcagcatgatggtgtttcgccgctggcgattggccgtgcacttgtt
gctaacatcaaagcgggtcgcaccgttcagggcggcagtaccttgactcagcagctagcg
aaaaacttattcctgacacgcgataaaaccttatggcgaaaagtccgtgaagcatacatt
gctctgattctggactaccgctacagtaaagaccgtattcttgaagcttacctaaacgaa
gtttacttaggtcagagcggtggggatgccattcatggttttgctttggcatcgcgttac
tacttcggtcaaccgattcaagagcttcgtatcgaccaactcgctatgttagttggtatg
gtgaaaggaccgtcttactacaacccaattcgctaccctgagcgcactaaaacccgtcgt
gacttggtattgcgtctgttgatgcaacaagacatgttgactgcagagcagtacgaacaa
gcggtaaatcgcccgctcgatacacagagcaaacctcgtatcgcgagtcgtcagccggcg
tacttccaacaactgaacattgagctgaaagaaaaagtaggtgataacttcaaagctgaa
acaggcttacgtttgtttacttctctcgaccctgtatcgcaaagtaagttagagcaagct
atcgcgaagaaagtccctgagcttgctaaacgtgccggaaaagatctagaagccgctgcc
gttgcggtagatcgccatagtggtgaaatccgtgccatggtcggtggtaaacgcgttggt
tatgaaggctttaaccgtgccttgaatgcgagtcgtccgattggctctttggttaaacct
gccatctatttaaccgcgttagagcaacctgagaaatacaaccttgcaacgaccctgcac
gatacgccgttaagcctaaagggcagtaaaggttcggtttggtcaccacgcaacttcgac
cgtaagttccgtggcgatgtgccgttgtacttagccttagcgaactccctcaatgtacca
acggtacgtttgggtatggagctgggtattccagaagtttcggatactttagagcgattg
ggggttgataagagcgaaattcgcccagtaccttcgatgttccttggttcattctcactg
acaccatttgaagtggcacagatgtatcaaacggtcactaactcaggcaagcgcgctaag
ttatcggcattacgctcggtgatcgacatggatggtaatgtactttaccagtcattgccg
cgctcatctcaagcggttgatcagcaagctgcgtggctaacgacttacgcgatgaagcaa
ggtgttgctcaaggtacgggacgcttcctacaaagccagttcgcatgggctgcgctagcc
ggaaaaacgggtaccagtaacgatagtcgtgacagttggttcgtgggtgtcgatggccgt
gaagtaaccacagtgtggcttggtcgcgatgataacaagtctaccaaactgactggttca
agtggcgcattacgtgtttacgcggaatacctaaagcaacgcatccctgagcgactagag
ttgccttggccaaaagaagtgaccacattaggtttccaaaaagctgctactggcgcgctg
gaaatgaactgtcgcagtgaatacaagctgccagtgtgggacaagtctgggcaaatcaaa
cagcagtgtgagaaaaaatcaaactggttgaatagcttatttgattggtag
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