Vibrio campbellii ATCC BAA-1116: M892_14120
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Entry
M892_14120 CDS
T02837
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vca03016
]
M892_14120 (truB)
Enzymes [BR:
vca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M892_14120 (truB)
Transfer RNA biogenesis [BR:
vca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M892_14120 (truB)
Prokaryotic type
M892_14120 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGU95449
LinkDB
All DBs
Position
I:3046198..3047142
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AA seq
314 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVETRPVDVNLEKLEACIDTFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIILHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHRDEVAPKELLDPLL
LPMDTAVEDLPEVNLKAELTNLVQHGMPVQVLGAPEGTPIRMTSGEDKLFIGVAEVNDDG
KVAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggcgttatcttgttggacaaaccaaca
ggtatttcttccaatgatgcactgcaaaaagtaaaacgtattttctttgctgaaaaagca
ggtcatacgggtgcattggacccactagcgacgggcatgttgccaatctgcttaggcgaa
gcaactaagttctctcagttcttgttggattcagacaaacgctatcgcgtaatcgcaaag
ttgggtgagcgtactgatacgtctgactctgatggcgaagtggtagagacgcgtccagtt
gacgtgaaccttgagaagttagaagcgtgcatcgacacgttccgtggtgaatcagaccaa
gtaccttcaatgttctctgcattgaaataccaaggtaagccattgtacgagtacgctcgt
aaaggcattgaagtgccacgtgaatctcgcaagatcaccgtatacgaaatcatacttcac
cgctttgaaggtgacgaagttgagatggaagtacactgctcgaaaggcacttacatccgt
actatcgttgatgacctaggtgaaatgcttggttgtggtgcacacgtgaccatgcttcgt
cgtacgggtgttgctaagtacccatacgaaaaaatggtgacgctagaacaacttaatgag
ttacttgagcaagcacatcgcgatgaagtagcaccgaaagagttgcttgatccactgctg
ttgccaatggacactgccgttgaagatttgcctgaggtaaacctaaaagctgagctaacc
aacttagtacaacacggtatgccagtgcaggtactgggtgcgccagagggtacgccaatt
cgtatgacttctggtgaagataagctgtttattggcgttgctgaagtgaacgacgatgga
aaagtggcaccaaaacgtttggtggttttccgcgacgaagagtaa
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