Vibrio campbellii ATCC BAA-1116: M892_14275
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Entry
M892_14275 CDS
T02837
Name
(GenBank) LuxR family transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M892_14275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vca03000
]
M892_14275
Transcription factors [BR:
vca03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
M892_14275
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
Trp_repressor
HTH_40
HTH_7
Sh_2
HTH_24
HTH_23
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AGU96806
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All DBs
Position
I:complement(3082262..3082927)
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AA seq
221 aa
AA seq
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MELSTQPLAVHLLSKDMSYTRVIRDLVKLSFPLVSFTTSDTFTHLDEEASQRIILFDVKS
MPCPKRYGICPMERKEKWVAMNVSSVSSLEWLEKGYSGQVCSRLELLPKALSAVSQGDVW
FPRPILNKAIYHYQEGGEDSTLTADYLSTKFLLTKREGEICKLMLQGLSNTQIARQSNVS
INTIKTHASNVLHKLNVHSRYELMAMAKKHSNLNIRNKGHY
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaactaagcacccaacctttagcagtacatctgctaagcaaagatatgtcatacaca
agagtgattcgcgacttagtcaaactttcttttcccttagtgagcttcaccactagcgat
acattcacccatttggatgaagaggcatcacaacgcattatccttttcgacgtaaaatcc
atgccttgcccaaagcgatacggaatttgtcccatggagagaaaagaaaagtgggtcgca
atgaatgtttcatctgtctcttcacttgaatggctagaaaaggggtattcagggcaagtg
tgctcccgtttagaacttcttccaaaggcgctttctgccgtttctcaaggagacgtgtgg
tttcctcgccctattttgaataaagctatctaccactatcaagaaggtggtgaggattct
actctcacagcagactatttaagcaccaagtttctgcttacgaaaagagagggtgagatt
tgcaagctgatgcttcaagggctctcaaatacacagatagcaaggcaatcaaatgtcagc
atcaataccatcaaaactcatgcttcaaacgtcttacacaaattaaatgtacactctcgc
tacgaattaatggcgatggcaaaaaaacactctaacctaaatataagaaacaaaggacat
tattga
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