Vibrio campbellii ATCC BAA-1116: M892_14605
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Entry
M892_14605 CDS
T02837
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M892_14605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vca03400
]
M892_14605
Enzymes [BR:
vca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M892_14605
DNA repair and recombination proteins [BR:
vca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M892_14605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
NAT10_TcmA_helicase
AAA_11
SLFN-g3_helicase
UvrD-helicase
Viral_helicase1
AAA_22
nSTAND3
AAA_16
UvrD_C
CbiA
DEAD
AAA_28
TrwB_AAD_bind
MukB
ResIII
DUF87
AAA_7
RNA_helicase
SRP54
T2SSE
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
AGU95501
LinkDB
All DBs
Position
I:3154841..3157018
Genome browser
AA seq
725 aa
AA seq
DB search
MKTNDLLSEQSSPVATRDLAATPDLLATLESLANKGAIRQLDFQFARFIYSQVEQQENSQ
ELAFIAGVVSSELGKGHICLLLFDGQGQPVDLASKLGLFGESALALNTQLQGVNWVELLQ
ASPLVGAQGEALPMMFDGERLYLHRYWHYEVTLADKLNQLSAAVNLQPQDFTRLSELLNH
LFARQYHFLFNALAKVVEAGTSNQVLPQQLVCDHLDVVTVDSLDWAAIDTAVNQAKQVHD
LQVLDKLVPLSACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQAGQEKN
LTIKLVAPTGKAAARLTESIGKAIQELPVEPELKAKIPTESSTLHRLLGAIPNSAEFRHN
KQNPLHLDILVVDEASMVDLPMMYKVVDSLPKHARLILLGDKDQLASVEAGAVLGDICSF
HAFGFGKEQASAVAKLTGFDTLAYSTNSNASIADSLCMLQKSYRFDARSGIGQLAKAVNA
GSAAKVDDVWSRDFADIEHFALSSQNYNQMMQTLVAEYGRYLKRIGQQEIDQKTGEPETL
THKAKAVLDTFNQCRLLCAIREGDFGVTGLNQRIEKALAARKLIQTQDELWYHGRPVMVT
RNDHGLGLYNGDIGICMRDDSEGEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKS
QGSEFEYTLMILPPDFSPILTRELIYTGITRAKKRLAMYAEMNVLKRGIKVKTTRASGLV
ERVRN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaatgatcttctttctgagcaaagcagccctgtggcaacacgagatctagcg
gcaacgccagatctattggcaacgttagaatcgctagcaaataaaggggcgattcgccaa
ttggatttccagttcgcgcgctttatctattcgcaagttgagcaacaagagaacagccaa
gaactggcatttattgctggtgtggtcagcagtgaattaggcaaaggacacatctgtttg
cttctgtttgatggccaagggcaaccagtagatcttgccagtaagctcggtctttttggg
gagtctgcgttagcgcttaatactcaactgcagggcgtcaattgggtggagcttctgcaa
gcgtcgcctttggttggtgctcaaggtgaagccttgccaatgatgtttgatggtgagcgt
ctctacttgcatcgttactggcactatgaagtgacgttggcggacaagctcaatcaactc
agtgcagctgtaaaccttcagcctcaagattttacacgtttgtctgagttgcttaaccat
ttattcgctcgtcagtaccactttctgttcaatgcattagccaaagtggtagaggcagga
accagcaaccaagtgttacctcagcagctagtctgtgaccatttggatgtggttaccgta
gacagcctcgattgggcggccattgatacggcagtcaaccaagcgaaacaagttcacgat
ctacaagtgctggacaagcttgtaccattatcggcttgtgttaactggcagaaggtcgcg
gcagcggtagcactgacgcgtcgttttgcggtgatttccggtggtccgggtacgggtaaa
actactacggtaaccaaactgcttgccgcattgattgagcaagcaggacaagagaaaaac
ctcaccatcaagctggtggcgccaacaggtaaagccgcagcacgtttgacggagtctatt
ggtaaagcgattcaagagttgccagtggagcctgagcttaaagcgaaaattccaaccgag
tcgagcactttgcatcgcctgttgggcgcgatcccgaacagtgcagagtttcgtcacaat
aagcaaaatccgctgcacctcgatattttagtagtggatgaagcctctatggtcgatctg
ccgatgatgtacaaagtcgtcgattcgctaccaaagcatgcgcgtttgattctactggga
gataaagaccagttggcatcggtagaagctggtgcggtgctaggtgatatctgttcgttc
catgcatttggctttggcaaagagcaggcgtctgcggtcgcgaagttgacaggctttgac
actttggcgtacagcaccaatagtaatgcttcgattgccgatagcttatgtatgctgcaa
aagagttaccgattcgatgctcgctctggtatcggccagctagcaaaagcggtcaacgct
ggctcagctgcaaaagtagacgacgtttggagtcgtgattttgctgatatcgagcatttc
gcactgagtagtcaaaattacaatcagatgatgcagactttggttgccgaatatggtcgt
tatttaaaacgcatcggacagcaagagattgaccagaagactggggaaccagaaacgctg
acccacaaagccaaagctgtgctggatacttttaatcaatgccgcttgttgtgtgctatt
cgtgaaggtgattttggtgtgacaggtttaaaccaacgtattgaaaaagcactagcagca
cgtaagctaattcaaacccaagatgaactttggtatcacggcaggccagtgatggtcacg
cgtaacgatcatggcttgggattgtataacggtgatatcggcatttgcatgcgagatgac
agcgaaggcgaaccgcgtctcaaagtgttcttcgaactgccagacggcagcgtgaagtcg
gtgctgccaagccgagtccctgagcatgaaaccgcatatgcgatgaccattcataaatca
cagggcagtgagtttgaatacacgctaatgattttgccgccagatttcagtccaatcctc
actcgcgagctgatctacacaggtattactcgtgcaaagaaacgccttgcgatgtacgcc
gagatgaatgttctcaagcgtggtattaaagtaaaaactactcgagcgagtgggttggtt
gagcgagttagaaattga
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