Vibrio campbellii ATCC BAA-1116: M892_15545
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Entry
M892_15545 CDS
T02837
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vca03016
]
M892_15545 (truA)
Enzymes [BR:
vca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
M892_15545 (truA)
Transfer RNA biogenesis [BR:
vca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M892_15545 (truA)
Prokaryotic type
M892_15545 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGU95661
LinkDB
All DBs
Position
I:3355549..3356343
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AA seq
264 aa
AA seq
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MRIALGIEYNGTNYFGWQRQREVKSVQEELEKALSVVANHPVEVQCAGRTDAGVHGTGQV
VHFDTNVSRKMVAWTMGANANMPSDIAVRWAVEVNDDFHARFSATARRYRYIIFNHALRP
GILNSGVSHYHGELDEKKMHEAGQYLLGENDFSSFRAAHCQSLSPCRNMMHLNVTRHGDY
IVIDIKANAFVHHMVRNITGSLIKVGRGEEKPEWIKSLLEAKDRKLAGATAKAEGLYLVD
VDYPEEFGLPRVPIGPLFLPDNLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcattaggtatcgaatacaacggtacaaactactttggttggcaacgccaa
agagaagtgaaaagtgtccaagaagagctagaaaaagcattgtccgtggtcgcgaatcat
cctgtcgaagtacagtgtgcgggtcgtaccgatgctggcgtacatggcactggtcaagtc
gttcactttgacaccaacgtgagtcgtaaaatggtggcttggaccatgggcgcaaacgcg
aacatgccaagtgatatcgctgtccgctgggcagtggaagtgaacgatgatttccatgct
cgattctcagcaaccgcacgtcgttaccgctacattattttcaaccacgcactgcgccca
ggtattttgaactctggtgtgagccactaccatggtgaactcgatgagaagaagatgcat
gaagcagggcagtatctactgggtgagaatgactttagttcattccgtgcggcacattgc
caatcattaagcccatgcagaaacatgatgcacttgaacgtgactcgtcatggtgattac
atcgtgattgatattaaagcgaacgcttttgtacaccatatggtgcgcaacattaccggt
agtctcattaaagtgggtcgaggcgaagaaaagccagagtggatcaagtcacttttagaa
gcgaaagatcgcaaattagcaggcgcaacggccaaagctgagggcctatatttggtggat
gtggactacccagaagagttcggattaccacgtgtgccgatcggtccgttatttttgccc
gataatttgaactaa
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