Vibrio campbellii ATCC BAA-1116: M892_16180
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Entry
M892_16180 CDS
T02837
Name
(GenBank) luminescence regulatory protein LuxO
KO
K10912
two-component system, repressor protein LuxO
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca02020
Two-component system
vca02024
Quorum sensing
vca05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M892_16180
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M892_16180
05111 Biofilm formation - Vibrio cholerae
M892_16180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vca02022
]
M892_16180
Two-component system [BR:
vca02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
M892_16180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_2
HTH_23
AAA_19
AAA_22
HTH_29
HTH_7
TIP49
PIF1
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AGU95728
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Position
I:3494750..3496153
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AA seq
467 aa
AA seq
DB search
MQQITEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILL
DLRLPDMTGMDVLHAVKKSHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRV
TVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERGKDVIEIAYSLLGYMSHEEGKSFVRFAQDVIERFNSYEW
PGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQSVAKFIEPDIMTVSDIMPLWM
TEKMAIEQAIQACEGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaataacagaaggtcaaaagtctcgttatctacttatggtagaagacaccgca
tccgttgcggcactttaccgctcttacctcacgccacttggcatcgatatcaatattgtt
ggaacaggcagagacgccattgaaagcctgaaccatcgcattcctgatcttattctgctc
gatcttcgtctacctgatatgacggggatggacgtattgcacgcggtgaagaaaagccac
ccagacgtgccaatcatcttcatgacagcccatggttctatcgatactgcggtagaggcg
atgcgccacggttctcaagacttcctaatcaaaccatgtgaagcagaccgtttacgtgtc
acggtgaacaatgcgatccgtaaagcaaccaaattaaagaatgaagctgacaaccccggt
aaccaaaattaccaaggcttcatcggcagtagccaaacgatgcagcaggtttaccgcacc
attgactcggcagcgagcagtaaagcgagtattttcatcacgggtgaaagtggtacgggt
aaagaagtgtgtgccgaagcgattcacgcagcaagcaaacgcggtgataagccgtttatc
gccatcaactgtgcggcaatcccgaaagaccttattgaaagtgagctgtttggtcacgta
aaaggtgcgtttactggtgctgcgaatgaccgacaaggtgcggcagagcttgctgatggc
ggcaccttgttccttgatgaactctgtgaaatggacttggatcttcaaactaagctattg
cgctttatccaaacgggtacattccaaaaagtcggttcttctaaaatgaagagcgtggat
gtgcgctttgtgtgtgcaactaaccgagacccttggaaagaagtgcaagaaggccgtttc
cgtgaagacttgtattaccgtttgtacgtgattcctttgcaccttccgccgctgcgtgag
cgtggtaaagacgttattgaaattgcatactcgttgcttggttatatgtctcatgaggaa
ggtaagagtttcgtccgtttcgcacaagacgtgattgaaagattcaacagctacgaatgg
ccgggtaacgttcgccagttgcaaaacgtattgcgtaatatcgtggtactgaacaatggc
aaagagatcacgctggatatgttaccgccaccactgaatcagcctgttgtgcgccaatcg
gtagcaaaattcattgaacctgacattatgacggtgtcagatattatgccgctttggatg
acagagaaaatggctattgagcaggcaattcaagcgtgtgaaggcaacattccacgcgct
gctggctatttggatgttagtccatcaacgatttatcgcaagttgcaagcttggaatagc
aaggacgaaaaacaaaacgtatga
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