Vibrio campbellii ATCC BAA-1116: M892_17115
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Entry
M892_17115 CDS
T02837
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vca03009
]
M892_17115
Enzymes [BR:
vca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
M892_17115
Ribosome biogenesis [BR:
vca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M892_17115
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
AphA_like
FF_URN1
DUF2098
Motif
Other DBs
NCBI-ProteinID:
AGU95842
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All DBs
Position
I:3700953..3701891
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AA seq
312 aa
AA seq
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MSEKLQKVLARAGHGSRREIESLIKSGRVSVNGIVAKLGERLEDENSVVRIDGHVVSAKA
QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGEVTEQKVKNLVRGVELEDGMARFEDVVYAGGEGMN
HTFYVAINEGRNREVRRLWESQDTTVSRLKRVRYGDIYLDKKLPRGGWMELDLKEVNYLR
ELVELRPEKETMLDLNKDNTSRKRERARSQKIRRAVKRHEERVNTPKGRSNNPSRRKPKK
TAGDQGARNKHR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagttacaaaaagtattagcacgtgctggacacggttctcgtcgtgagatc
gaatcgttaattaaatctggtcgcgttagcgtgaacggaatcgtagctaaacttggtgaa
agactggaagatgagaacagcgtagttcgtatcgatggtcacgttgtgtctgctaaggcg
caagaagaagtgatctgtcgtgttttggcttactacaagccagaaggtgaactatgtact
cgtcacgaccctgaaggtcgtcgcactgttttcgatcgcctgccaaagatccgtggttct
cgttggatttcagttggtcgtcttgatgcaaacacatcaggtctactgctgtttacaaca
gatggtgaactggcgaaccgcctaatgcacccaagccgtcaggttgaacgtgaatatctt
gttcgtgttttcggcgaagtcactgaacaaaaagtgaaaaacttggttcgtggtgttgag
cttgaagatggcatggcacgtttcgaagatgtggtatatgcgggtggtgaaggtatgaac
cacacgttttatgttgctatcaacgaaggtcgtaaccgtgaagttcgtcgtctgtgggaa
tctcaagacacgacggttagccgcctaaaacgtgttcgttacggtgacatctatctggat
aagaaactgcctcgtggtggttggatggaacttgatctgaaagaagtaaactacctacgt
gaattggtagaacttcgtccagaaaaagaaaccatgctggatctgaacaaagacaacacg
tcacgtaagcgtgaacgtgctcgtagccaaaaaatccgtcgcgcagttaagcgtcacgaa
gagcgcgtaaatacaccgaaaggtcgcagcaacaatccttctcgtcgtaagccgaagaag
actgcgggtgaccaaggtgcacgtaacaagcatcgttaa
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