Vibrio campbellii ATCC BAA-1116: M892_22140 Help Entry M892_22140        CDS       T02837                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism vca  Vibrio campbellii ATCC BAA-1116 Pathway vca03018   RNA degradation Brite KEGG Orthology (KO) [BR:vca00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     M892_22140  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vca03019]     M892_22140 Enzymes [BR:vca01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      M892_22140 Messenger RNA biogenesis [BR:vca03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      M892_22140 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII SNF2-rel_dom P-loop_SecA Helicase_RecD AAA_19 ERCC3_RAD25_C Helicase_C_2 AAA_32 Motif Other DBs NCBI-ProteinID:  AGU97479 LinkDB All DBs Position II:952991..954256 Genome browser AA seq 421 aa AA seqDB search MRFIMSVNFADLGIEQQLVDTLSGMNIVTPTPVQEKSIPPVLEGKDLLAAAQTGTGKTAA FGLPIIQSVQQKKRNGAPQALILVPTRELAQQVMDNLTQYAANTDLKIVCVYGGTSIGVQ KKKLEEGADILIATPGRLLDHLFNGNVIIAKTGILVLDEADRMLDMGFWPDLQRILRRLP QDKQTMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAY LIGSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKAGKVRA LIATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRARKSGLAVSLMSRDEEYLLT AIENLLDQRLPQEWLEGFEPSLIEEVEPERNGGGRRKSRSSEKRKMKAKLAIHKNRGKNR K NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atgaggtttatcatgtccgttaatttcgctgatcttggcattgaacaacagttggttgat accctaagcggtatgaatattgttactccgacacctgttcaagaaaagtcgattccaccc gtattggaaggcaaagatctcctggctgctgcgcaaacaggtactggcaaaactgccgca tttggcttacctatcatccaatcagttcagcagaagaaacgtaacggcgcgccacaagca cttattcttgtacctacgcgagagcttgctcaacaagttatggacaacctgacccagtac gcagcaaatacggaccttaagattgtttgtgtttatggtggtacgagcatcggcgttcaa aagaaaaagttggaagagggcgcagatattcttatcgcgacgccaggtcgtttgctggat cacttgtttaacggcaatgtaatcatcgctaaaacgggcattcttgtacttgatgaagca gaccgcatgttagacatgggtttctggccagatctgcaacgcattcttcgtcgtttacct caagataaacaaaccatgctgttctcagcaacgtttgagaagcgcattaaaaccattgct tataaactgatggactctccagttgaagtggaagtgtcgccagccaacactacggcagaa accgttaagcaaatggtttatccagttgataaaaagcgtaaacgtgagctattggcttac ttaattggttctcgtaactggcaacaagtgcttgtctttacaaaaaccaagcaaggcagt gatgagctagcaaaagagcttaaactggatgggatcaaagcggtctctatcaacggcgac aaatctcaaggtgctcgtcaacgtgctcttgatgaatttaaagcaggtaaagtacgtgcg ttaatcgcaaccgatgtggctgctcgtggtctggacattcaagagctagagcaagtggtg aacttcgatatgccgtttaaagccgaagattatgttcatcgtatcgggcgtacaggtcgc gctcgtaaatcaggcttggcggtttctttaatgagccgcgacgaagagtacttattgacg gcgattgaaaacctacttgaccaacgtttaccgcaagagtggttagaaggtttcgaaccg agtttaatcgaagaggttgagccagagcgtaatggtggtggtcgccgtaagagtcgctct tcggaaaaacgtaagatgaaagcgaaactcgctattcataaaaaccgcggtaaaaaccga aaataa

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