Venturia canescens: 122405610
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Entry
122405610 CDS
T09386
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122405610
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122405610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_2
ResIII
HEAT_EZ
HEAT_ECM29
Androgen_recep
RIX1
Motif
Other DBs
NCBI-GeneID:
122405610
NCBI-ProteinID:
XP_043266463
LinkDB
All DBs
Position
1:8709248..8720756
Genome browser
AA seq
1968 aa
AA seq
DB search
MASRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHELHHLLARVSALLKSPQWDTRVS
AAHAIQAILAQVPQWDPEPSKDEIHDTGGSDTAREGNTNNRLTLEGFDMVQLLARSSHLT
GSEGKEYDLVVSDGDQNASVQQGEKLLAARLGLDPRITGVDTAELFTAEDLTLPMAPCGT
TTGLGKVSINEALAQPVSGGLSRREMNRARRKARQSLSKQRSRDPDDSQEPNQPSSNSVE
SLKKKIKLEESVTTMPAMGEPSSSNSSVSAISQDSGGVSGGGSTNFHGAVPDGTGCWPES
AIDWPLESFSESLCQDLFGQKWEVRHGAATALRELIRLHGKGAGKSKDQTKSEMEESHRR
WVIDAALRLLCVLGLDRFGDYVSDQVVAPVRETCAQALGSLVLLMQNSENKDVMGILDVT
LKLLEHDEWEARHGALLALKYLLAVRDDLLDELLPRAFPAAMRGLADPVDDVGAAAASAL
IPVATALPRLLHPNQLQAVIARLWELLREQDDLAAACNSFMGLLAAIISLPAARACLSPQ
PLSEVLPRLWPFLSHSSSSVRKATLQTLQTLTGEDVDRSEDRRERWGEDGSVVLQEALRN
VFQRVLIEHVAPIQQVAEKVWENLVVRSDLEMLLHAACPLVSTWLCLAMQPEHVPFNPGL
LCNSSVPPIARQPRPTNGTNGEGHQQQQQQQQQQQQQQQQQQQQQLDCGSSNGSVKSTTS
ELKVYIGGIETVAQNTRRANSIRARCMAARMLGLLSRYVVQPAPGVVYTPDIPSPDLCYA
RVLLAHLASRSALQRTVVGLTMAHWAALEQPKPPEIPEILSEKLLGCLTECVYYDEIAGA
FTRLLHDSRDYVATLKHYKLLLPLDDEPATVMTLEQISNLAAKPVGGLLLSSTGTTTGTP
NANNAAHKLKPKLIQSLEERRKALEIGASGTAAQQQALNVMSMAALAGSATMFHCLPQAP
RPLNPLVKPLMEAIKREEDEDLQKLAAKHLAHLVDLCADRTPSPNTKITTNLCTFLCSDL
EFTPRLTEQKEVNPYDGILTLNNRQRHAERIAYNRGAGCGGVGGGRGPGRPPATDIPLEE
LLACEEPEAKASRTRRRGATLALTAIANLIGARLPSRLPHLWQLMIVNNQKNEDVAFSGL
NGDEAVEKIRDDVNNLVFGLQVLEIMGPSLDRSLLPPVMECLPRLCSLLTHPYKVVRHMA
SRCLSALADLDTKKVMEYVVRLVVPLLEIRNNDVSGSKGDSRVIATPNDFDIRRQGAAEA
LTCIVENLGVRVVPYAVLFMIPLLGRMSDQNTAVRLACSATLATLVQLLPLDPGSISDPP
ELMMEKAQERRFLEQLLNPRSIPDAKLPVNVAAELRSYQQQGLNWLDFLNRYQLHGVLCD
DMGLGKTLQTLCILALDHHRNPKAPASLVVCPPTLTGHWVYEVEKFIPSQDLSVIQYAGT
PPEREKLRSRAMHYRLVVASYDIVRKDIDFFEAVQWNYCVLDEGHVIKNGKTKSAKAAKK
LRAHHRLILSGTPVQNDVLELWSLFDFLMPGFLGSEKQFAAKYSRPILACREPKAGPKEQ
ETGALAMEALHRQVLPFLLRRNKEDVLKDLPPKITQDYYCDLSPIQRSLYEDFRTRHSAT
LMNTSSDSTTNEANNSPRGHVFEALRYLRNVCNHPKLVLSPRHPQYQSVCAQIKQQQTTL
TDIEIAAKLPALKQLLIDCGIGQAQQPHQQQQIVSQSSRKNSVITTSLLPSSLGDAPPTA
PPQQLVSQHRALIFCQLKAMLDIVEKDLLSVHLPTVTYLRLDGSVPATQRHAIVARFNAD
PSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT
RSTVEEKIMGLQKFKLHTANTVISTDNSSISTMGTDQLLDLFSLDNGKDSKSSTQGDTSA
ATKNVISGVPGVAKSVFEILPELWEQQQYDDEYDLDAFLATLKSSDSQ
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagattggacagacttttcatactcctggagactggaacaaatgcggtgacg
aagcgagcagccgcgcaacaattaggagaagctcagagacttcatcctcacgagttgcat
catttgttggccagagtgtcagcgttattgaaatcgcctcaatgggatacgagggtgtct
gccgctcatgccatacaagcaatacttgctcaagttccacaatgggatccagaaccttct
aaagacgaaatacacgataccggtggtagcgatacagcaagagaggggaatactaacaat
cgcttgactctagagggtttcgacatggtacaattattggcgagaagctctcatctgact
ggatccgagggaaaagagtacgacctcgtcgtatccgatggagatcaaaacgcgagtgtt
caacagggtgaaaaattattggcagcgaggcttgggctggatccaaggataacgggtgtc
gatacggcagaattatttacagcggaggatttaacattgccaatggctccgtgcgggacg
acaacgggactcggcaaagtttcgatcaacgaggcactagctcaaccagtgtcgggtggt
ttgagtaggcgtgaaatgaatcgagcgaggcgcaaagctcgacaatctttgtcgaagcaa
cgttcccgagatcccgacgatagtcaagaaccgaatcagccgtccagtaactcggtagaa
tctctgaagaagaaaatcaaattggaggaaagcgtcacgacgatgcctgcaatgggtgag
ccgtcctcgtcgaattcaagcgttagcgcgatcagtcaagattcagggggagtaagtgga
gggggatcgacaaattttcacggagctgtaccggacgggaccggttgttggcccgaaagc
gcaatcgattggccactcgagtccttcagtgaatctctctgtcaagatctctttggtcaa
aagtgggaagtgcgccacggagcggcaacggcgctacgggagctcatacgcttgcacggt
aaaggggcaggcaagtcgaaggatcaaacgaaaagtgaaatggaggagagtcatcgtcgg
tgggtgatcgacgcggcacttcgactcttgtgtgttttgggtctcgatcgattcggcgat
tacgtgtccgatcaggtcgtcgcaccggtcagagaaacttgcgctcaagccctcggttct
ctcgtactgctaatgcagaatagtgagaacaaggatgtgatgggtatactggacgtgacg
ctgaagcttctggaacacgacgaatgggaagcgcgtcacggagctcttctcgcgttgaag
tatttactcgctgtacgggatgaccttctcgacgagttattaccgcgagcatttccagcg
gctatgcgcggactggcggatccggtggatgacgtgggcgctgcagcggcgagtgcgctt
ataccggttgccacggcgctcccaagacttcttcatccgaaccagctgcaggccgtaatc
gcaaggctctgggaattgttgcgcgagcaagatgatctggcggcagcttgcaacagtttt
atgggtttattagctgcaataatatcgttaccagcggctcgggcttgtctcagtccccaa
ccgctgtcagaagttttgccgaggctttggccgtttctcagtcactcaagttcgagcgtg
cggaaagcaacgctgcaaactcttcaaacacttacgggagaagacgtcgaccgtagcgag
gatcgacgggaacgttggggcgaggatggcagcgtggttttgcaagaggctctgcgcaat
gtgtttcagcgggtacttatcgagcacgtagccccgatacaacaggtagccgaaaaagtc
tgggaaaatctcgtggtgcgcagtgatttagagatgttgttgcacgcggcttgtccactc
gtgagcacgtggctctgcttggcgatgcaaccggagcacgtgccatttaatcccggtctt
ttgtgcaacagttcggtgccaccgatagccagacagcccaggccgacgaatggtacgaac
ggggaaggacatcaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcag
cagcagcaacagcaactcgactgtggaagtagcaatggcagcgtcaaatctactacgagc
gagctcaaagtctacatcggaggaatcgaaactgtcgctcagaacacgcgaagagcgaat
agcattagagcgaggtgcatggctgcgagaatgcttggtctgttgtctcgttacgtcgtt
caaccagcccccggtgtcgtttatacaccggacataccaagccctgacttgtgttacgcg
agagtactccttgcccacctcgcctcgcgttcggcgctccaaaggaccgtagtaggtctg
acgatggctcactgggccgccctcgagcaaccgaaacctcccgaaatacctgaaattctc
agtgaaaagcttctcggttgtctcaccgagtgcgtatattatgacgaaatcgccggtgca
ttcacgaggctccttcacgatagtcgcgactacgtcgcaaccctcaaacactataaactt
ttgttgccgctcgacgacgaaccagccactgtaatgactctcgaacaaatatcaaattta
gcagcgaaacctgtcggaggcttactactttcatccacaggtacaaccaccggaacaccc
aacgccaacaatgcggcacacaaactcaaaccaaagctcatacagagtctcgaggagaga
agaaaagctcttgaaatcggtgcttctggcactgccgctcagcaacaagctctcaacgtt
atgtcaatggcagctctcgctggatcagccaccatgtttcattgcttaccgcaagctccg
cgccccttgaatcctctcgtgaaacctctcatggaagccatcaaacgcgaggaggacgaa
gatttgcaaaaacttgccgccaaacacctcgcacatctggtcgatctctgtgccgatcgt
acaccatcacccaacactaaaataactacaaatttgtgtacattcttatgctctgacttg
gaatttacaccgaggctcaccgagcaaaaggaagtcaacccgtacgacggtattttgacg
ctgaataatcgtcaaagacacgccgaacgcatagcttacaaccgaggggctggatgcgga
ggtgtcgggggcgggagagggcccggaagaccaccggcgactgatatacccctggaagag
ttgctcgcttgcgaggaacccgaggcgaaggcatcacgaactcgtcgacgcggtgcaact
ctagcactcactgccatagcgaatctcataggagcacgattgccgagccgactaccacat
ttgtggcaattgatgatcgtgaacaatcagaagaacgaagacgttgcgttctcaggcttg
aacggcgacgaggctgttgaaaaaattcgggatgatgttaacaatttggtattcggattg
caagttttggaaataatgggaccaagtttagatcgttctcttctgccacctgtgatggag
tgtttgccacggctgtgctcgctgctgactcatccgtacaaggtcgtcagacacatggcg
tcccgttgtttgtccgcgttggccgatttggacacgaaaaaagtgatggaatacgtggtt
cgcttggttgtgccactcttagagattcgaaacaacgacgtgagcgggagcaagggagac
tcccgagtgatcgctactccgaatgattttgacatacgtcgtcagggggcggccgaggcg
cttacatgcattgtagaaaatttgggtgttcgggtcgtgccttatgccgtacttttcatg
attcctttactcggcaggatgagcgatcaaaacactgctgtgagattagcctgcagcgca
acacttgcgacgctcgttcaattgttgccgttggacccaggctcgatatccgatccaccg
gagctaatgatggaaaaagctcaagagagacgttttctcgaacaactattgaatcctcgg
agtattcccgacgccaaattgccggtaaacgttgccgcggaattgcgctcttaccaacag
cagggtctcaattggctcgactttttaaatcgttatcaacttcacggtgtactctgcgac
gacatgggcctcgggaaaacgcttcaaacactgtgcatactcgctctcgatcaccatcgg
aatcccaaagcaccggcgagcctcgtagtttgcccacctacgttgaccggtcattgggtc
tacgaagttgagaaattcattccatctcaggatctatcggtcattcagtacgccggtaca
ccgcccgaacgcgagaaacttcgttcacgagcgatgcattatcggctggtcgttgccagc
tacgacatcgtacgtaaagacattgactttttcgaggctgtacaatggaattattgcgta
cttgacgagggccacgtcataaaaaatggcaaaacgaaaagtgctaaagccgctaaaaaa
ctgcgtgctcaccatcgcctcattctttccggcacacccgtacaaaacgacgtactcgaa
ttgtggtctctttttgattttcttatgcccggatttttgggtagcgaaaaacaatttgct
gctaaatactcaaggcccattctcgcgtgcagagaacccaaggctgggcccaaggagcaa
gaaactggtgcattggctatggaagctctgcatcgacaggttttgccattcctattacgt
cgcaacaaggaagatgtactcaaagatttaccaccgaaaatcactcaggattactattgc
gatttgtcaccgatacaacgaagtctttacgaagatttccgtacccgacactcggcgact
ttgatgaatacttcttcggactcgacgactaacgaagcaaataattcgccacggggccac
gtcttcgaggcgcttcgctatcttcgtaatgtctgtaaccatccgaagcttgtgctgagc
ccccgccacccccagtaccaatcggtatgcgcccaaataaagcagcaacaaactacgtta
acggatatcgagatcgcagcaaaattgccagccctgaaacaacttttgatcgattgtggt
atcggccaggcccaacaaccgcaccaacaacagcaaatcgtgtcgcaatcgtcgcgtaaa
aatagtgtaataacgacgagtcttttgccgagttctcttggcgatgctccaccaaccgcg
ccgccacaacagttggtcagccagcatcgggctctcatattttgtcaattgaaggccatg
ctcgatatcgtcgagaaagatttgctcagtgttcacttgcctaccgtgacatatctgcga
ttggacggcagcgtaccggcaacacagagacacgcaatcgtcgcacgcttcaacgctgat
ccttccatagacgtgctgttacttactactcaagtcggtggtctcgggctcaaccttacc
ggcgccgatactgtcatattcgtcgaacacgattggaatccaatgaaagatctccaagcc
atggatcgagctcatcgcatcggacagaaaaaagttgtaaatgtttatcgactcatcaca
agatctaccgtcgaagaaaagattatgggcttgcaaaaattcaaattgcacacagccaat
accgttatatcgactgataattcctccatcagcactatgggcacagaccaactgctggat
ttattttctctggacaacggaaaggattcgaagtcgagtactcaaggcgacacgagtgcg
gcaacgaaaaacgtcataagtggagttcccggtgtcgctaaatcggtgtttgaaatattg
ccagaattgtgggagcaacaacagtacgacgacgagtacgatcttgatgcttttctcgct
acacttaaatcgagtgacagccagtga
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