Venturia canescens: 122406045
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Entry
122406045 CDS
T09386
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
vcan
Venturia canescens
Pathway
vcan04120
Ubiquitin mediated proteolysis
vcan04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122406045
04120 Ubiquitin mediated proteolysis
122406045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcan04121
]
122406045
Enzymes [BR:
vcan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122406045
Ubiquitin system [BR:
vcan04121
]
Ubiquitin ligases (E3)
U-box type E3
122406045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
122406045
NCBI-ProteinID:
XP_043267135
LinkDB
All DBs
Position
2:9657245..9667508
Genome browser
AA seq
1114 aa
AA seq
DB search
MSELSQEEMRRRRLARLAGLEPGTPTNSNGAAGMAPASLNTPGPSKPTPLQQQVGSSTSA
TIEHIAQPEVAMDVEENSDKQCNTFGVDVDSGIENMEVEETDRKDPAPRSRTTSSSTEIT
VEQIHTVISRVLCVAWKEPNEGGIFLSQTSSTVEAHKIDDYMDIASQALMEVMYMFARGE
DPMREIVVSTPSDREDSPNSQASPLLSPVATLPSYPVSTLPLPSGSKLSQPKSFLYLLDC
YTRVAVEERNHPKRSSVPPLSDVLAGLRAQCVQYASLVLQGLVGLCQTSISTNFSTPLLY
PVLTQTLPRGFLHELVARTHSNPHVFNKIFTPLLQGLYLSMQQASLVGNTHRRPIEALEE
LIEIRCGTSGNIRPICRLITHQIQFLPDVMTTAVGRELARTSFLGPFLSVSVFAEDSPKV
AEKFFSGNPSSDKSINLTLQQELESTRTSLHKMLHAILANSACREATLAYLAALLRHNEK
RAQIQTEEFALAGDGFMLNLLSVLQMLSVKIKLDMVDPLYPFYPSSFVEIKNDTRLKLTS
QEVTEWLVDLEKTHKWTEAKFPTQCWFLTLHCHHVALLPALQKYQRKLRALRDLQKMLDE
LQATEPQWKDAPFAGHNKEMIKRWKQQLKRLGKSKSCADAGLIDPVLLRRSLHFYTSVAE
VLLGLLTQTLPGVPLPALPLPQEIPHKFTALPEWYVEDIAEFLLFTLQFSPGVVANNMDN
SLITWLLVVICTPHCIRNPYLIAKIIEVLFVINPSVQGRTETLHDQVMSHPISKTYLASY
LMKFYTDVETTGSSSEFYDKFSIRYHISLILKSMWDSPIHRASIVNESNNGKQFVKFINM
LMNDTTFLLDESLESLKRIHEVQELMSELSQWMELSQEQRQSRSRQLTADERQARSYLTL
AKETVSMFHYLTVDITEPFLRPELVGRLSAMLNFNLQQLCGPKCKNLKVRKPQKYGWEPR
TLLSQLVDIYLHLDCDSFAAALASDERSFGKELFTDAANRLGRSAIKTTTEIERFMALAE
KAAVIARDNRARDEDYGDAPEEFRDPLMDTLMEDPVKLPSGIIMDKAVIIRHLLNSSTDP
FSRQPLSEDMLTPEPDLKERISVWKQQKKKSGSI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattgagccaagaggaaatgagaaggcggagattagcccgtttagcgggtttg
gagccaggcacaccgacgaattcaaacggcgctgctggaatggcgccggcttcgctgaac
acgccaggcccttccaaacctacgccattgcagcaacaagttggatcttcgacatctgcg
actatagaacacatagcacaacctgaagtagctatggatgtggaagaaaacagtgacaaa
cagtgcaatacttttggagtggatgtagattctggaattgaaaatatggaagtcgaagaa
actgatagaaaagatcctgctccaagatcgagaacaacgagttccagtactgaaattaca
gtcgagcaaattcacacggtgatatcgcgggtgctctgtgttgcatggaaagaaccgaat
gagggtggaatatttttgtcacaaacatcgagtacggtggaagctcacaaaattgatgat
tatatggatattgcgagtcaagcattgatggaagtaatgtacatgtttgcacgtggtgaa
gatcctatgagagaaattgttgttagtacaccctccgatcgagaggacagtccaaatagt
caagcgagtccattgttgagtcctgtcgcgactttgccatcgtatccggtatctacacta
ccactaccatcaggcagtaagctttcacagccaaagagtttcctctacttgttggattgt
tacacaagagttgccgttgaagagagaaatcatcctaagcgttcgagcgtcccaccgcta
tcggacgtattggctggtcttcgagcccaatgcgttcaatacgcaagcctcgttctacaa
ggacttgtcggactgtgccaaacatcaatatcgacaaatttctcgacgccgcttctctat
cccgttttaacgcaaactttaccgcgtggttttttgcacgagctggtcgctcgaactcac
tcaaatccgcatgtcttcaacaaaatatttacgccgctcctacagggcctctatctctcg
atgcagcaggcaagtttggtcggtaatactcacagacgaccgatcgaggctctcgaggaa
ctcattgaaattcgatgcgggacgagcgggaatatccgtccgatttgtcgtttgataacg
catcaaatacaatttttgccagacgtaatgacaacggcagtcggacgtgagcttgcgaga
acatcgtttctcggtccatttctttcggtatcagtctttgccgaagactctccaaaagtt
gctgaaaaattcttcagcggaaatccatcgagcgataaatcgataaatctgacgttgcaa
caagaattggaaagcaccagaacatcgctgcacaaaatgttacacgcgatactggctaac
agtgcatgtcgggaagcaaccctcgcatatttagctgcgctgttgcggcacaatgaaaaa
cgcgctcagatacaaaccgaagagtttgcactcgccggtgacggtttcatgctcaatctt
ttatcggtattacagatgctttctgtgaaaataaaactggacatggttgatccgctatat
ccgttttatccgtcgagctttgtggaaataaagaacgatactcgattgaaattgacctct
caggaagttactgagtggctcgtagatttagaaaaaacacacaagtggactgaggccaaa
ttcccgactcaatgctggttcttaactttgcactgtcatcacgtcgctcttttacccgct
ttgcaaaagtaccagagaaaattacgagcccttagagatttgcagaaaatgcttgacgag
ctgcaagccaccgagccacagtggaaggacgcaccatttgccgggcacaacaaagaaatg
atcaagcgctggaagcaacaattaaaacgtcttggcaaatcgaaatcttgcgcagacgcc
ggcctcattgaccctgtcctgcttcgaagatctctacatttttatacttcggtagccgag
gtattgctcggtttactcacacaaactcttcccggtgtgccattgccggcgctaccatta
ccgcaagaaataccccacaaatttaccgctcttcctgagtggtacgtcgaagacatcgct
gagttcctcctattcacacttcaatttagtccaggtgttgtggcgaacaatatggacaac
tctctcatcacctggcttctcgttgtcatatgcaccccgcattgcataagaaatccgtat
ctcattgccaagataatcgaagttcttttcgttataaatcccagcgttcagggacgaact
gaaacgctacacgatcaagtgatgtcacatccaatatcaaaaacttatctggcttcctat
ctcatgaagttctacacggatgtagaaacgacgggatcaagctccgaattctacgacaaa
ttttccattcgataccacattagcctgattttaaaatcaatgtgggacagtccaatacat
cgtgcgtcgatagttaacgagagcaataacgggaaacagttcgttaagtttataaacatg
ttgatgaacgatacgacttttttgcttgacgagagcctcgagtcgttgaaacgcatacac
gaggtgcaagaactaatgtcggaactgagccagtggatggagctttctcaagagcaacga
caatcgcgctcgagacaattgaccgcggacgaacgacaggccaggtcgtatttaacactg
gccaaagaaactgtgtcgatgtttcactatttaacggtcgatatcaccgagccattctta
agacccgaactcgtcggccgtttgagcgctatgctcaactttaatttacaacaattgtgc
ggtccgaagtgcaaaaatttgaaagttcgcaaacctcagaagtatggctgggaaccgaga
acattgcttagtcaattggttgatatttatttacatcttgactgtgatagttttgctgct
gcactagccagtgacgaacgttcgttcggcaaggaattgttcaccgatgcggctaacaga
cttggtcgatcagcgataaaaacgaccacggaaattgaaagattcatggcgcttgcagaa
aaagcagcagtcattgcgagagacaaccgggcacgagatgaggattacggcgatgcaccc
gaagaattccgagatcctttaatggatacgctcatggaagatcccgtcaaattaccgtcc
ggcattattatggataaagccgttattattagacatttactcaacagctcgacggatccg
ttcagtcggcaaccacttagcgaagatatgctcacgccagagccggatttgaaagaacga
atatcagtatggaagcaacaaaagaaaaaatctggaagcatataa
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