KEGG   Venturia canescens: 122406243
Entry
122406243         CDS       T09386                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
vcan  Venturia canescens
Pathway
vcan03030  DNA replication
vcan03410  Base excision repair
vcan03420  Nucleotide excision repair
vcan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122406243
   03410 Base excision repair
    122406243
   03420 Nucleotide excision repair
    122406243
   03430 Mismatch repair
    122406243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcan03032]
    122406243
   03036 Chromosome and associated proteins [BR:vcan03036]
    122406243
   03400 DNA repair and recombination proteins [BR:vcan03400]
    122406243
DNA replication proteins [BR:vcan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122406243
  DNA Replication Termination Factors
   ELG1-RFC complex
    122406243
Chromosome and associated proteins [BR:vcan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122406243
DNA repair and recombination proteins [BR:vcan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122406243
  Check point factors
   HRAD17(Rad24)-RFC complex
    122406243
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_30 AAA_22 AAA_11 AAA_lid_RFC1 Mg_chelatase AAA_14 Gp44_lid AAA_19 AAA_24 SLFN-g3_helicase DUF815 Rad17 DEAD AAA_5 AAA_assoc_2 bpMoxR ATPase_2 ResIII DNAX_ATPase_lid AAA_7 MCM RuvB_N nSTAND_NTPase5 nSTAND3 AAA_28
Other DBs
NCBI-GeneID: 122406243
NCBI-ProteinID: XP_043267532
LinkDB
Position
2:complement(20952168..20956053)
AA seq 357 aa
MQSFLKTGKLGPSEVRKASTSKSKDQRVGPAAPWVEKYRPRTVEDVVEQAEVVQVLRQCL
SGGDFPNLLLYGPPGTGKTSTILAAVRQLFGDMYKERILELNASDERGIQVIREKVKSFA
QLTASAVRHNGKACPAFKVVILDEADSMTTAAQSALRRTMERESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLSQDKIIERLEYICKEEDIVTEKPVLMELVEASDGDLRRAITSLQS
VTRLKGKGIPITVNDVLEVSGVVPHNWLERMLQVCESREYNMIEQFIDDFMLEGYAGSHA
VEQLNDIIIRSDSFTDKQKTFLGEKLAECSYRLLEGGSEYLQLISLCCAISKAFSIK
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcagtcgtttttgaaaacgggaaaactgggaccgagtgaagtcagaaaagcttcgact
tcgaaatcgaaggatcaaagagtaggtccagcagcaccttgggtagaaaagtataggcca
aggacagtggaggatgtggttgaacaggcggaagttgtacaggtactgcgtcaatgcttg
agtggtggagatttcccaaatttgttgttgtatggcccaccgggaacaggaaaaacgagt
acgatattagctgcagtacgtcaactcttcggcgacatgtacaaggaaagaattctcgag
ttgaatgcatcagacgaacgaggaattcaagttatccgggagaaagttaaatcgttcgct
cagctgacggctagtgctgtgagacacaatggaaaagcatgtccagcatttaaagttgtt
attttggacgaagccgacagcatgacaacggcagctcaatctgctttgcgtcgtactatg
gaacgagaatctcacagcactcgtttttgtctgatttgcaattacgtttctcgtataatt
gagcctcttacatcgcgttgtaccaaattccgtttcaagcctctgagtcaagacaaaatt
atagaacgtctggaatacatttgcaaggaagaagatattgttacggaaaaaccagttttg
atggaactggtagaagcttcggacggtgacctgagaagagccataacttctcttcaatcg
gtcaccaggctcaaaggtaaaggaattccaataacggtcaacgatgtcctcgaagtgagc
ggcgttgtgcctcacaattggctcgagcgcatgcttcaagtttgtgaatctagagaatac
aatatgattgaacaattcatcgatgatttcatgctcgaaggttacgccggctcacacgcc
gttgaacaactcaatgatatcatcattcgatccgattcctttaccgataaacaaaaaact
tttcttggggaaaaactcgccgaatgcagctatagattgctcgaaggtggtagcgaatat
ttacagctcattagcttatgctgcgccatatctaaagctttttccataaaataa

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