Venturia canescens: 122406243
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Entry
122406243 CDS
T09386
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
vcan
Venturia canescens
Pathway
vcan03030
DNA replication
vcan03410
Base excision repair
vcan03420
Nucleotide excision repair
vcan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122406243
03410 Base excision repair
122406243
03420 Nucleotide excision repair
122406243
03430 Mismatch repair
122406243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcan03032
]
122406243
03036 Chromosome and associated proteins [BR:
vcan03036
]
122406243
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122406243
DNA replication proteins [BR:
vcan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122406243
DNA Replication Termination Factors
ELG1-RFC complex
122406243
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122406243
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122406243
Check point factors
HRAD17(Rad24)-RFC complex
122406243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_16
AAA_30
AAA_22
AAA_11
AAA_lid_RFC1
Mg_chelatase
AAA_14
Gp44_lid
AAA_19
AAA_24
SLFN-g3_helicase
DUF815
Rad17
DEAD
AAA_5
AAA_assoc_2
bpMoxR
ATPase_2
ResIII
DNAX_ATPase_lid
AAA_7
MCM
RuvB_N
nSTAND_NTPase5
nSTAND3
AAA_28
Motif
Other DBs
NCBI-GeneID:
122406243
NCBI-ProteinID:
XP_043267532
LinkDB
All DBs
Position
2:complement(20952168..20956053)
Genome browser
AA seq
357 aa
AA seq
DB search
MQSFLKTGKLGPSEVRKASTSKSKDQRVGPAAPWVEKYRPRTVEDVVEQAEVVQVLRQCL
SGGDFPNLLLYGPPGTGKTSTILAAVRQLFGDMYKERILELNASDERGIQVIREKVKSFA
QLTASAVRHNGKACPAFKVVILDEADSMTTAAQSALRRTMERESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLSQDKIIERLEYICKEEDIVTEKPVLMELVEASDGDLRRAITSLQS
VTRLKGKGIPITVNDVLEVSGVVPHNWLERMLQVCESREYNMIEQFIDDFMLEGYAGSHA
VEQLNDIIIRSDSFTDKQKTFLGEKLAECSYRLLEGGSEYLQLISLCCAISKAFSIK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgtttttgaaaacgggaaaactgggaccgagtgaagtcagaaaagcttcgact
tcgaaatcgaaggatcaaagagtaggtccagcagcaccttgggtagaaaagtataggcca
aggacagtggaggatgtggttgaacaggcggaagttgtacaggtactgcgtcaatgcttg
agtggtggagatttcccaaatttgttgttgtatggcccaccgggaacaggaaaaacgagt
acgatattagctgcagtacgtcaactcttcggcgacatgtacaaggaaagaattctcgag
ttgaatgcatcagacgaacgaggaattcaagttatccgggagaaagttaaatcgttcgct
cagctgacggctagtgctgtgagacacaatggaaaagcatgtccagcatttaaagttgtt
attttggacgaagccgacagcatgacaacggcagctcaatctgctttgcgtcgtactatg
gaacgagaatctcacagcactcgtttttgtctgatttgcaattacgtttctcgtataatt
gagcctcttacatcgcgttgtaccaaattccgtttcaagcctctgagtcaagacaaaatt
atagaacgtctggaatacatttgcaaggaagaagatattgttacggaaaaaccagttttg
atggaactggtagaagcttcggacggtgacctgagaagagccataacttctcttcaatcg
gtcaccaggctcaaaggtaaaggaattccaataacggtcaacgatgtcctcgaagtgagc
ggcgttgtgcctcacaattggctcgagcgcatgcttcaagtttgtgaatctagagaatac
aatatgattgaacaattcatcgatgatttcatgctcgaaggttacgccggctcacacgcc
gttgaacaactcaatgatatcatcattcgatccgattcctttaccgataaacaaaaaact
tttcttggggaaaaactcgccgaatgcagctatagattgctcgaaggtggtagcgaatat
ttacagctcattagcttatgctgcgccatatctaaagctttttccataaaataa
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integrated database retrieval system