Venturia canescens: 122406280
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Entry
122406280 CDS
T09386
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122406280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122406280
03021 Transcription machinery [BR:
vcan03021
]
122406280
03036 Chromosome and associated proteins [BR:
vcan03036
]
122406280
Transcription factors [BR:
vcan03000
]
Eukaryotic type
Helix-turn-helix
ARID
122406280
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122406280
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
122406280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
BAF250_C
Motif
Other DBs
NCBI-GeneID:
122406280
NCBI-ProteinID:
XP_043267591
LinkDB
All DBs
Position
2:complement(5092463..5132330)
Genome browser
AA seq
1804 aa
AA seq
DB search
MANILNKDPVTYERERDSFLRELHHFHETRGTSFKKSPKISGKDIDLYLLYVLVTAHGGW
MKVNTRNEWSALCEQFHLPGGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDEDEDS
RHRKWSARALHSVPLTYNYHQHNVAESLRDYNGLSANLYKPSNYDKLALSLLSPLPNEQD
FAINVCTLLSNEGKHTLRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRVRNYSINSF
WSDVLDSQDVIDLTDERIFMKKPTSNLNTFSRRKILEKEKPNKTTSNVSQDVEPVLMEVD
VPPMDCLRLEPTLSLEDDNPTDQNQNSIKFEEDDKDLFCVGRTLGTQDPYGQRVLQIASI
LRNLSFTPENAAVLGRNRCFLRFVLLCTRARWSNLHQLGFDILGNIANEIILKEAGERIT
DAVLSCVAKGVSSQDRFIVISCLEILNKVSQQDSNEEIITFGLEDEVYELICRFLALSDI
ALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVS
TLTPAPPSTTGLPTPAAAAPAPVPVTPTRTPTPTPVPTPAQPISVPSPPIPIPPTPTAVS
PVPSRPSTPATPATKVTAHKTTEVTTPVHHPIHAHQQVIQENEQFALGWLRATFEPSANI
RIEQEELYKKYLGCCTKIGRRGVIAPLHFPKVVRSVFGNSIGPNPLKGETTGVQYYEGIR
VRVSPPSTTHPSQNAVGTNTVTIPSINTTPVKVHHVQQRTVKPISPVGDSTHSDNSNMSV
NPRIQAPASPILKAQLSAPPKPSSNAPTQPQNPVTKVDSKSQVSVTHPHLSQALLASGSQ
MHQQQQQPQQQQQQQHHQPQQQNPQIQVVAKEDNRIGATSSSIIKSLLATKVTVSGDCMP
SAAATCVSAPTACVTNTTASIASSISANQLITTNQVAQRQQQQRLLQQQLTGVVQPAAPG
ATPAPILIKAPVNSKSQKPAIATIPARKIQRLNGAKVIVTNNCDKTEVSDTENNSQTITS
TMVVSTMTDNHISTSPKVCRPPQAILASNKNNQRVISTPLAEDSDSTNNSLASSSGIGGS
RDCSGVGAEEENSLTSFEGILLNGAPNSLDMDAQDDGSSKDSSSIGSKDKPLQSMMLADL
LERKVDKEPIMNGVLGKSSIHEEGMDLVENHIKKVLKESPTDAKIKNDVDGINVIQPEVS
EDALIEAPRGMKRRTSEASDEVDAKKPKYSNGTTSPDPAADSTTIESTVSSIKSEDPDDD
KATVSSTAANLYAALAADCIEDETDLEDPPPPLAPPPAPIKEEPVVVKEEPRTFINQMIQ
HQQHQQQPQQQLIVTGSRQIVVQQAIQSNNQIIIPATQLKGRTHGSQPQVLLQQSPSGQI
QYVVSGGVPGQNYVLAQSQTALVQGQAQTVLVAQTTQQQGTGAKTIIILQPQSAPTQNTQ
KMVAMTPQGQQVVVTQVPRPLLQSSALANIPPPLVATSATIPQASIIVNSSVAQSTPNAM
TVTIPAIAQQCPVTTSLPSRVVTPTPASTPPPTRPTTPHQAASTHGLPVKQAVKIVKTVS
SSTSTEPESKPSTSQQTSENKTITIKIDPNAFLCEWRGCLRQFKTAHEVYLHVCEAHCPT
NGEEILCLWASCDGLKRRKFSLMTHLYDRHCNSESMTLRRKQLTASGKTEISTSTPPTPH
HPGYAPNAAFHAIKRHALEFVNPKELMQQRPTKPAAAISSSSSPRPGQNPPPEQDDNEGP
VTKSIRLTAALILRNLVIYSAHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSN
STHR
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atggctaatatcctcaacaaggaccccgtcacctatgaacgggaacgtgacagcttcctc
agggagcttcatcacttccacgaaaccagggggacgagtttcaagaaatcaccgaaaatc
agtggcaaggacatcgatctctacctgctgtatgtcctcgtcacagcccatggcggatgg
atgaaagtaaacacgagaaacgaatggtcggcattgtgcgaacaatttcacctgcctggc
ggctgtgtaaacagtggtgtcggactcaagcaaatttatctccggtatctcgataggtac
gagaaagtacattttcttggcgaggatggtcaacaggctgacgacgaggatgaggactct
cgacaccggaaatggtcggcaagagcactgcactcggttcctctcacttacaactaccat
caacacaatgttgcagaatctttgcgggattacaatggtctctcggcgaatctttacaaa
ccatcaaattacgacaagctggcgctctcgttgctctcaccgttgccaaacgaacaggac
ttcgcgatcaacgtttgtactctattatcgaacgagggaaagcacacattgcgtctcgac
aaatatccgaggctcgtgaacatacttctggcacatgccggcgtattcgattcaccgggt
acccgccaattgttcatcgaagtctactcccgagtacgaaattactcgataaactcgttt
tggtcagatgttctcgactcacaggacgttatcgatctcactgacgagaggatattcatg
aaaaaaccaacgagtaatctcaacacgttttctcgtagaaaaatattggaaaaagaaaaa
cctaacaaaacaacgagcaatgttagtcaggatgttgaaccggtgcttatggaagtcgat
gtgccacccatggattgtttgcgactcgaaccaactttgtctctcgaggacgataatccg
accgatcagaatcaaaattcgataaaatttgaagaagacgacaaagatttattttgcgtc
ggtagaaccttaggcactcaagatccatacggacaacgagttcttcaaatagcttcaatc
cttcgaaatctcagttttacgcccgaaaacgctgcagttctcgggagaaatcgatgcttc
ctaagattcgtattgctttgcacccgagcgagatggagcaatttgcatcaactcggcttc
gacatacttggcaatattgccaatgaaattattctcaaggaagccggagagagaataacg
gatgcggtattatcgtgtgttgcaaaaggcgtcagttcgcaggataggtttatcgttata
tcctgcctcgagatcctcaacaaagtcagccaacaggacagcaacgaggagatcattact
tttggtctcgaagacgaagtttacgaactcatatgcaggtttttggccctgagtgatatc
gctcttctcgtgtataccctcgagtgtttgtacgcccttacatctttgggcgaaaggccc
tgtaccagcgttgcccgagtccgaggggccatcgacacgttagttgctctcgtaaccgtc
gaagcccagagttacggccctaaagcttgcatcctaatgagggtagttgagacggtgtca
actttgactcctgcacccccatcgacgacaggacttccgactccggctgctgcagcacca
gcaccagtaccggtcacaccaacgcggacaccaaccccaaccccggtcccaactccggct
caacccatttccgttccttccccaccgattcctatacctccgacgccgaccgcagtcagt
ccagtaccttcgcggccgagtactcctgccacgccagctacaaaagttacggcgcacaaa
acaacagaagtaacaacgcctgtacaccatccgatacacgctcatcagcaagttattcag
gaaaacgaacaattcgccctcggttggctgagagctacattcgagccctcggcaaacatc
cgcatcgaacaggaagaattgtacaaaaagtatctcggctgttgcacaaaaattggaaga
cgaggtgttatcgctcccctgcattttccaaaggtcgtgagaagcgtgtttggtaatagc
atcgggccgaatccattgaaaggtgaaacaacaggtgtgcagtactacgagggtattcga
gtacgagtgagccccccatcgacgacgcatccgagccaaaacgcggttggaacgaatacc
gtaacgataccatcgattaacacaactccagtaaaggtgcatcacgttcaacagcgtaca
gtcaaaccaataagtcccgttggcgatagcacgcattccgataattccaatatgtccgta
aacccaagaatccaagcacccgcgtcacccatattgaaggcccagttgtcagccccgccg
aaaccatcctcaaacgctccgactcaaccccagaatccagtcaccaaggttgactctaaa
agtcaggtgtccgtgacgcacccgcacctaagtcaagcgttgctagccagtggctcgcaa
atgcaccagcagcaacaacaaccacaacaacaacaacaacaacagcatcatcaacctcaa
cagcagaacccacaaatccaagtagtggccaaagaagacaatcgaataggagcgacctca
agttcaataataaaaagcctgctggctacgaaggtaacggtcagcggcgactgcatgccc
agcgccgctgcgacttgtgtgtctgcccctactgcctgcgtaacaaacactactgctagc
atcgcatccagcatcagtgccaaccagctaataaccaccaaccaggttgctcaacgtcaa
caacagcaaaggttacttcaacaacagttaaccggagtcgtacaacccgccgcgccagga
gcaacaccggccccgattctaatcaaagctcctgtcaattcgaaatcgcaaaagcctgca
atcgcaactattcctgccagaaagatacaaaggctcaatggagccaaggtcatcgtgact
aacaactgtgacaagactgaagtgagcgatactgagaacaacagtcaaacaataacttca
acgatggtagtctcgaccatgactgataatcacatatccacaagtccaaaggtgtgtcgt
ccaccacaagcaatattggcatcgaacaaaaacaatcaacgggtaatatcaacacccctg
gcagaggattcggattcaacgaacaattcgttagcatcgagcagcggtataggtggtagt
cgagattgttcaggtgtcggggccgaagaagagaattcattgacgagtttcgaaggtata
ttattaaacggcgcgccgaatagtttggatatggacgcgcaagatgatggttcgtcgaag
gattcatcgagcatcggttcaaaagataaaccactgcagagtatgatgctcgctgatttg
ttagagagaaaagttgataaagagccgataatgaacggtgtattgggaaaaagttcgata
cacgaggagggtatggatctcgtagaaaatcatataaaaaaggtgctgaaagaatccccg
acagatgcgaaaataaaaaacgatgtcgatggtataaacgtaatacaaccggaggtgtcg
gaagatgcattgatcgaggcgccacggggaatgaagagaagaacgagcgaggcaagcgac
gaagttgacgcgaaaaaaccgaagtactcgaacggtacaacgtcaccggatccggcggca
gactccacaacaattgagtctacggtatcgagtataaaatcagaagatccggacgacgat
aaggcaactgtatcatccaccgcggcaaatttatacgccgcattggcagctgattgcata
gaagacgaaaccgacctcgaggatccaccaccacctctggcaccaccaccagcaccgatc
aaagaagagccagtagtcgtaaaggaagaacctcgaacgttcatcaatcaaatgattcaa
catcaacaacatcagcaacaacctcaacaacaactgatagtcacgggctcgaggcaaatt
gtcgttcaacaagccatacaatcgaacaatcagattatcattccggccacccaactcaag
ggcagaacgcacggttcacagccacaagttcttcttcagcagagccctagcggacaaatt
caatacgttgtttcgggtggtgtgcccggacaaaattacgtactggcacagtcacaaact
gcactcgtacagggtcaagcgcaaacggttctcgtagcccagactacccaacaacaggga
actggtgctaaaacgataattatacttcagcctcaatcggcacccacccagaacacccaa
aaaatggttgccatgacgccacaaggacaacaagtcgttgttactcaagttcctcggcct
ttgttgcaaagttcggcacttgccaatataccaccccctctcgttgcaacctcagcgact
attccccaagcttccataatagtcaacagttcggtagcacaaagtactccgaatgcaatg
accgtcacgattcctgcaatcgcgcaacagtgtcctgttacgacgagcttaccttctcgc
gtcgtaacgcccacgcccgcatccacaccgccacccacaagacctacgacaccgcatcaa
gccgcatcgacgcacggtctccccgttaaacaagcagtaaaaattgtcaaaaccgtcagc
tcgtcaacgtcaacggaacccgaatccaaaccttcaacgagtcaacaaacgtcggagaat
aagaccatcaccattaaaatcgatcccaatgccttcctctgcgagtggcgaggatgcttg
agacaattcaaaacggcacacgaagtttatctgcacgtatgcgaagcacattgtccaacg
aatggagaagaaatcttgtgtctttgggctagttgcgacggacttaagcgacgaaaattt
tctcttatgacgcatttgtacgataggcactgcaactcagagagtatgacactgaggcga
aaacagttgaccgcgagtgggaaaacggaaatctcaacgtcaaccccaccgactccccat
catcctggttacgcaccgaacgcagcgtttcatgccataaaaaggcacgccctcgaattt
gttaatccaaaagaattgatgcagcagaggccaaccaagcccgctgcagccatctcaagc
tcttcttccccaagacctgggcaaaaccctccgccagaacaggatgacaacgaaggtcca
gtgactaaaagtattcgtctgacagcggctctcattcttagaaacctagtcatatactct
gcgcacggaagaagacaccttcgagcatacgagcctcatttggcaggagtggcactaagc
aatgtagaatcgtcgaggacaatcgcccaggttctgtacgacatgaacgatcagagtaac
agtactcacaggtga
DBGET
integrated database retrieval system
