Venturia canescens: 122406500 Help Entry 122406500         CDS       T09386                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism vcan  Venturia canescens Pathway vcan04512   ECM-receptor interaction vcan04518   Integrin signaling Brite KEGG Orthology (KO) [BR:vcan00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122406500    04518 Integrin signaling     122406500  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:vcan00536]     122406500 Glycosaminoglycan binding proteins [BR:vcan00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122406500 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC FnI_RECK NELL_VWC_C VWC2L_2nd Motif Other DBs NCBI-GeneID:  122406500 NCBI-ProteinID:  XP_043267911 LinkDB All DBs Position 2:complement(3886197..3895683) Genome browser AA seq 1555 aa AA seqDB search MFNRVIIVTLAGLVLAQLMAWHFVDSAKTRRHRSRPVQSQQPAVPTNDYSEFEYYENYDD YEDNRNETTTDDAPPDGQDRTEYPISAPEATPSSRPEVLTNPPDRGSTSGPEDERPEDDC EFDGVLRRHGESWDPLECTTCVCLRGQVDCSKSPSCRTENPIGSIPLQDELDGPRSTEIV PGESNQVNSIAVSGPRGEPGRRGDSGRPGDSGLPGQPGNPGIPGLPGPPGPVPDVSVYYQ QLALSQASGDKGPTGAAAPLYGGPEGYGYVSAQVGPVGPRGPPGPPGPQGPQGFQGTRGD AGEPGLPGPPGTQGPRGLPGLNGKDGEPGDDGEPGAVGSPGPAGPRGLSGMPGLPGAKGH RGFPGLDGAKGEQGLAGEKGSAGGPGPMGVMGPSGPGGPRGERGREGPPGPPGLRGIDGT AGSPGQPGSMGKPGPPGFPGGPGAKGDQGVQGPKGSQGLQGPRGESGRPGQPGESGPQGA QGKDGSPGEKGNVGSPGLVGAPGFPGARGQPGTPGSPGVLGPKGQPGFPGERGFKGDSGT KGDTGAPGPRGLPGVPGSEGKRGKRGMRGPIGASGPQGERGPSGPRGLPGADGPSGPKGQ TGDRGSTGSMGPKGSTGDPGRPGPQGLQGQRGLIGRTGSIGKPGNPGDRGIQGADGKPGE QGPPGLQGLPGPIGFPGDKGFPGEAGKDGEPGNPGPPGPRGDSGKEGPVGQQGPPGPPGA DGERGPQGQPGSRGFQGLPGATGNAGPPGKDGEPGSQGPTGLPGPAGNRGERGFPGDRGP VGVPGAPGLRGETGSQGSDGLPGLPGPRGDKGHSGAMGLVGLPGLRGSPGESGQKGERGS AGPAGPEGPPGRIGERGPQGTVGPPGAPGEPAERGDAGAPGPPGEQGAPGSIGERGPQGI QGSQGFPGPQGLVGLPGLKGDRGWPGLKGDQGSPGQAGTPGEMGPTGPAGLTGSKGMRGE PGPRGETGLMGAPGIPGLIGAAGHPGAVGPPGPQGLPGIKGTAGDSGRPGNPGLIGNPGA PGADGIKGESGSDGSPGPIGPQGLQGLPGERGLPGIPGASGPVGARGLRGAPGETGISGK PGSEGPPGPPGFMGPPGPPGPTGESGAEGAPGKQGLPGISGRPGDKGPPGVPGAPGAAGP PGLTGPPGTAGSPGATGERGPKGDSGPQGVEGQQGLRGKPGPVGLEGPKGDRGPEGPQGA KGHRGLIGLQGLPGVAGLPGDKGIPGMPGMPGKDGDPGSRGSPGRDGSPGPMGVAGNPGV RGPAGETGRPGPTGPQGPPGPPGPPGELGLGYDAASLAALLSAGQGQKGPDPLSGDEPPR LFGKDMSNEERRELVTKAYEQLKASYEKIVRPDGEKNSPAKTCRDLFVAHPEKSSGEYWI DPNGGDSRDAILVHCDAEKRATCVLADPARSFQINHIGNEQEIWLSEIDGGMKITYKADS NQVGFLQLLSKHAEQNITYHCKETVAYFDSERRTYRRGMKLLAWNDVELTPRGNQRLRYE MILDECRLRGKEWGKTIVNYETEKSVRLPIVDLAFRDIGKPEQSFWVEIGPVCYR NT seq 4668 nt NT seq  +upstreamnt  +downstreamnt atgtttaatcgcgtcatcatcgttactctcgcgggcctcgtattggcccagttaatggcc tggcatttcgtcgattcggcgaaaactcgaagacatcgttcaagacccgtgcaatcgcag caacctgccgtccccactaatgattacagcgagtttgagtattacgagaattacgacgac tacgaggacaatcgaaacgaaacaacgaccgatgatgctccacccgatggccaggaccgc acagaataccccatttccgcaccggaagcgacaccttcctcgagaccggaagtcctcacg aatcctccggatcgaggatcaacgagcggccccgaagacgagcgtcccgaggacgactgc gagttcgacggagtattaaggagacacggcgaatcatgggaccccctagaatgcacaacg tgcgtttgcttaaggggacaagtcgactgctccaaaagcccatcatgtcgaacagaaaat ccaatcggatcgattccactgcaggatgagctcgatggtccacgatcaactgagattgtt ccgggcgagagcaatcaagtgaattccatcgcagtctcgggaccacgcggtgaacccgga agacgaggagacagcggacgccccggagactcaggattgcctggacaaccgggaaatcct ggaatacccggtcttccaggacctccgggacctgttccagacgtttcggtgtactatcaa caactggctctgtcccaagcgagcggtgacaaaggccccacgggtgctgctgcgcctctg tacggtggtcctgagggctacgggtacgtgagtgctcaggtcgggccggttggtccccga gggccaccaggaccacccggaccgcaggggcctcaaggatttcaaggaacgagaggcgac gcaggcgagcctggcttacctggtccgcccggaacgcagggtcctcgaggtttgcccgga ttgaacggaaaagacggtgaacctggcgacgatggggaacccggtgctgtgggctctcca ggtccggcaggtcctcgaggcttgtcaggcatgccaggactgccaggtgccaaaggtcat cgtggattcccaggactggatggagccaaaggggagcaagggctggctggcgaaaaaggc tcagctggaggaccagggcccatgggggtgatgggaccgtcgggacctggcgggcctcgg ggagaaagaggacgagaaggtcctccaggaccaccaggtttacgagggatcgacggcaca gcgggatcgccaggacaaccgggctcgatgggtaaacccggaccccctggattcccaggc ggacctggagcaaaaggtgaccaaggtgttcaaggcccaaaagggagtcaaggtctccaa ggtcctcgaggcgaatccggaagaccgggtcaacccggagaatcgggtcctcagggagcc caaggtaaggatggatccccgggtgagaaaggcaacgtcggatcaccgggattggtcgga gcgcccggattccctggagctcgaggccagcccggtactcctggaagccctggagtttta ggacccaaagggcagccgggtttccccggtgagagaggattcaaaggtgacagtggaacg aaaggggatacgggagcaccaggtccaagaggacttccaggggttcctggctcagagggc aagagagggaaacgagggatgcggggtccgatcggcgcctccggccctcaaggcgaaaga ggaccgtcgggacctcgaggactgcccggggcagatggacccagtggtccgaaaggtcaa accggtgaccgcggctccacgggttcaatggggcccaaaggttctaccggtgaccccggc aggccaggaccacagggactgcaaggtcaacgagggctaatcggacgcaccggctcgatt ggcaaaccgggtaatccgggagaccgcggaattcaaggagctgatggcaagcccggggag caggggccaccgggattacaagggctgccagggccaataggcttcccaggcgacaaaggc tttcccggcgaagctggcaaagacggtgaacctggaaatccggggccaccgggaccgcga ggtgactcgggcaaggagggtcccgtgggccagcaaggacctcccggcccacctggagct gatggagaaaggggaccacaaggacaaccgggctctcggggatttcagggcctaccagga gccaccggaaatgcaggccctccggggaaagatggagagccgggatcgcagggccctacc ggacttccaggtcctgctggaaatcgaggagaacgcggttttcctggagacagaggtcct gtgggagttcccggtgctccgggtttgaggggtgaaaccggaagtcaaggatcggatggc ttgccaggtttgcccggtccaaggggcgacaaaggccactcgggggcaatgggattagtg gggttgccgggtctgagaggctctccaggtgaaagcggtcaaaaaggtgagcgaggctct gccggtccggccggacctgaaggtcctccaggccgcatcggagaacgtggtccacaagga acagtcggtcctccgggtgctccgggtgaaccagctgaaagaggcgacgcgggtgctcct ggacctcctggagaacagggggctcccggaagcatcggggaacgaggtccgcaaggaatt cagggctcgcaaggattccctggtcctcaaggactcgttgggttgcctggactgaaagga gatcgcgggtggccgggactcaagggcgaccaaggctctccgggacaagccggtactcct ggggaaatgggccccacgggaccggctgggttgacaggctccaaggggatgcgcggcgag ccgggaccacgaggagaaactggcttgatgggggcgccaggaataccgggcttgatcggc gccgctgggcaccccggagcagtgggaccacccgggcctcaaggcttgccgggaatcaaa ggaactgcgggcgacagcggacgtccgggaaaccctggcctgataggaaatccgggagct cccggtgctgatggaattaagggcgaaagcggatccgacgggtcgccagggccgatcgga cctcagggacttcaagggctacctggcgagaggggtttgccgggtatcccgggtgcctcc gggccagtgggagcgagagggttgagaggagcccccggtgaaacaggaatatcgggcaaa cccgggtcagaagggcccccggggccaccgggattcatggggccgcctgggccaccaggc cccactggcgaaagtggcgccgaaggagctcccggcaaacaaggcttacctggtatcagc gggcgacccggcgataagggaccacccggagttcctggtgctccaggagctgcgggtcca ccaggactcacgggaccaccgggaacagccggatctcctggagccactggagagcgggga ccgaagggtgacagtggcccccagggcgtcgaaggacaacagggtctccgagggaaacca ggtcccgtggggttggaaggaccgaagggcgatcgtgggccggaaggtcctcagggtgcc aaaggtcatcgcggtctcatcggactccagggtttacctggtgtagccggtcttcctggc gacaaaggtataccgggaatgccaggaatgcctggtaaagacggtgaccctggttcgcga ggaagtccagggcgggatggaagtccagggccgatgggggtcgctgggaaccctggagta agaggtcccgccggtgaaacaggacgccctgggcctacgggacctcaaggaccacccggt ccaccaggccccccgggggaactcggcttgggttacgatgctgcatcgcttgcagctctt ttgagtgcgggtcaaggacaaaagggaccggatccactgagcggcgacgagccaccaaga ctctttggaaaagacatgagcaacgaggaacgaagggaactcgtaacgaaagcatacgag cagctgaaagcttcgtacgaaaaaatcgttagaccggatggtgaaaaaaattctccggca aaaacatgcagagacctcttcgtggctcatcccgaaaagtcatctggggagtactggata gatccgaacgggggagattcccgtgacgcaattttggtccactgtgacgccgagaaacga gctacctgcgttctcgctgatccagcccgctctttccaaatcaatcacatcggtaacgag caagaaatttggttgagtgaaatcgacggaggcatgaagataacttacaaagcagacagc aaccaagtaggatttttgcaactgctgtcgaagcacgcagagcagaatataacttaccat tgcaaagagaccgtggcatatttcgattccgagcgtcgaacttatcgtcgaggaatgaaa cttttggcgtggaacgacgtggaattgacaccgaggggtaaccagaggcttcgttacgag atgatcctggacgagtgcaggttacgtggaaaagaatggggcaaaacgatcgtgaactac gagacagaaaaatcggtgaggcttccaatagtcgatttggcgttccgagacatcggcaaa cccgagcaaagtttctgggtggaaatcggtccggtttgctatcgatga

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