Venturia canescens: 122406513
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Entry
122406513 CDS
T09386
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
vcan
Venturia canescens
Pathway
vcan03022
Basal transcription factors
vcan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122406513
09124 Replication and repair
03420 Nucleotide excision repair
122406513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122406513
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122406513
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122406513
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122406513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
122406513
NCBI-ProteinID:
XP_043267946
LinkDB
All DBs
Position
2:15745927..15748221
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AA seq
297 aa
AA seq
DB search
MEASGGNEIERSLLIVILDVNPVQQIVKQDARILTHCLDSVIVFANAHLMQTSSNDIALM
ACHASGAKFLYPYEKSDEVRQIDGQYEKFTLVERNVRQKLQEVVIGDILNDRQINSESLI
SGALTMALCYTARLEREKLPGEKLHCRILIVTGSNDSATQYMNYMNIFFTAQKMGVILDV
CSLDQELTLLQQACDITGGNYLKVPSPAGLLQYLLWVFLPDPEVRSKLVLPPPVKVDYRA
ACFCHHELIDIGYVCSVCLSIFCKFSPICTTCHTLFKMPGPIPMKTKKKKKYADIVH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagtggcgggaatgaaatcgagagaagtctcttaatcgtcattcttgatgtg
aaccctgtgcagcaaatagtcaaacaagatgcaaggatcttgacgcactgtctcgattct
gtgattgtatttgcaaatgcacatcttatgcaaacttccagtaatgacattgctcttatg
gcatgtcatgcgagtggcgccaaatttttatatccgtatgaaaagtcggatgaagtaagg
cagatcgatggacaatacgaaaagtttacgcttgtcgagcgtaacgttagacaaaaattg
caagaggtcgtcatcggtgacattctcaatgacaggcaaatcaatagcgaaagtttaatt
tctggtgctctcacaatggctctttgctacaccgctcggttggagcgtgaaaaactgcca
ggcgaaaaacttcattgccgtatattgattgtcacaggaagcaatgattcggctactcag
tacatgaattacatgaatatttttttcaccgcacaaaaaatgggtgtgatactggatgtt
tgcagcttggatcaggaattaactcttctacaacaagcttgcgatataacgggtggcaat
tatctcaaagttccttcacctgctggcctgttgcaatatctactgtgggttttcctgcct
gatcctgaagttcgttcaaagcttgttctaccacccccagtaaaagtcgactacagagca
gcgtgtttttgtcaccacgagctcatcgatatcggatacgtttgttctgtttgcttatca
attttctgcaagttcagtccgatttgtacaacctgccacacattatttaaaatgcctgga
ccaatacccatgaagacgaaaaagaagaaaaaatatgcagatatagttcattga
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