Venturia canescens: 122406828
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Entry
122406828 CDS
T09386
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
vcan
Venturia canescens
Pathway
vcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122406828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122406828
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122406828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122406828
NCBI-ProteinID:
XP_043268520
LinkDB
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Position
2:complement(3065524..3067312)
Genome browser
AA seq
272 aa
AA seq
DB search
MASLYKSIYPVKYLRDYLTQNIRPDGRDFLTFRPISINVSSITHADSSAIFKIGNTTVVC
GIKAELSVPKAATPDKGYVVPNVSLSPICSPKFRPGPPSDQAQETSQLVYSILRDSDILD
LSSLCICKDKLVWVLYCDMECIDCDGSVIDACIGALIASLATLTLPEVAYNPETGSTIVH
TSKRHSVPIKSLVTSTTFAVFDNELLIADPTEEEETQSLTHFTIAMDKDVLCCVHKPGGV
AISTDLFVKSLTRAKKRAERVRELIDTAITSK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattatacaagtccatttatccggtcaaatatttgagggattatctgacacaa
aatatcaggcctgacggtagagattttttgacttttcgaccaatcagcatcaatgtttct
tccatcacacatgcagacagttcagctatatttaaaattggcaatacaactgtagtctgt
ggaatcaaagctgaattgtcagtcccgaaggcagcaacaccggataagggatatgttgtt
ccgaatgttagtctcagcccgatctgctcaccaaaattcagacccggaccacccagtgat
caagctcaagaaacttcacaacttgtttacagtattttgagagattcagacattctagat
ctctccagtctttgtatttgcaaggacaagcttgtttgggttctgtactgcgatatggaa
tgcatagactgcgatggttcagttatcgatgcatgcatcggtgctctaatagcttcactt
gctactttgacacttcccgaagtggcgtataatcctgaaactggttcaacaattgttcac
accagcaaaagacactctgttcctataaaaagtttagtcacgagtacgacatttgctgta
tttgataacgagcttcttatcgctgatccaacagaagaagaggaaactcagtccctgaca
cactttactatagcaatggataaggatgtcttgtgctgtgtccataaaccaggtggtgtg
gcgatttcaacagatctttttgtcaagagtttgacaagagccaaaaagcgagcagaacgt
gtccgagaattgattgatacagcaataacatcaaaataa
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