Venturia canescens: 122406846
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Entry
122406846 CDS
T09386
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
vcan
Venturia canescens
Pathway
vcan04080
Neuroactive ligand-receptor interaction
vcan04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122406846
04082 Neuroactive ligand signaling
122406846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcan04040
]
122406846
Ion channels [BR:
vcan04040
]
Ligand-gated channels
GABA-A
122406846
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122406846
NCBI-ProteinID:
XP_043268560
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Position
2:complement(3691906..3706052)
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AA seq
561 aa
AA seq
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MAVITFSFVLLVLAVPLGMCWRNHSIHPRSTWPMAPILVNQSDENSAASSPSLPSTTLIF
PDTRITRAIVNDVVSKNITMVLENLLMNYENSQLPTHGQGTPTVVKTNILIRSMGPVSEL
DMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPN
KLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYTSRQLVYEWQEGSS
VNFEPGMALSQFDLMGYPYRNLTYVRREGEFSVLQVSFNLQRNTGYFLIQVYVPCVLIVV
LSWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCIA
TLLEFAGVHYFTKIGSGEIPLDESEWEDWEDVTTIIDNKQDNQYNEALSPVNARSPQTVH
SETSIGASSRRRSSVLCAVYNPDSTTLGMNTRFTISAAVTCKPSTMERQTQTELCLPKWR
QFLYCLAGDDAFRRRREREAAGGCRKHGERIERHINSVSYIDRVARIVFPASFGLLNVCY
WVVYVTCQEEFKWQDPPIGSI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaataacattctcgttcgtgctcctcgtcctcgcggtgcccctcgggatgtgt
tggcggaaccactcgattcatccgagatcgacttggcccatggccccgattctcgtcaac
cagtccgacgaaaactccgcagcatcctccccgtcgcttccatctactactctcatcttc
cccgacactagaatcacacgagccatcgttaacgacgtcgtctccaaaaatattacgatg
gttcttgagaacctgctgatgaattacgaaaacagccaactcccgactcacggacaaggt
actcctaccgtcgtgaagaccaacattttaattagaagcatgggcccagtttcggagctt
gatatggactattcgatggattgttacttccggcaatcttggcgcgactcgcgtttgagc
ttcctcggacccattaaatcgctgagcctcagcatcaaaatgctcgaaagaatatggaga
ccggacacttatttctacaatggaaaacacagttacgttcataccattacggtgccaaac
aaacttttaagaatatcccaagacggcgatattttgtattcgatgagactcactataaag
gcgaagtgtccgatggagctgaggaacttcccgatggatcggcaatcctgtccgctgatc
cttgggagctacgcgtatacgtcgagacagttggtttacgagtggcaggaaggctcgtct
gtaaatttcgagcccggtatggcgctctcgcaattcgacctgatgggctacccctaccga
aatctcacctacgtcagacgggaaggcgagttctcggtcctccaggtctccttcaatctg
caacgaaatacaggatattttctcattcaggtttacgtaccgtgcgttttgatagtcgtt
ctgagctgggtatcgttctggatacatcgcgaagcaacgagcgacagagtgggtctaggc
atcacaactgtgctgactctctcgacgataagccttgactcgaggacggacttgcccaaa
gtccgatacgctacagccctcgactggtttttgctgatgagctttggctactgcatcgcg
accctgctcgaattcgcgggcgttcattacttcactaagattggaagcggtgagattcct
ttggacgagagcgagtgggaggattgggaagacgtcacgacgatcatcgacaataaacag
gataatcagtataacgaggcgttgagtcccgtcaatgctcgcagtccgcaaaccgtccat
tcggaaacttcgatcggcgcttcctcgaggagacgcagttcagtgctgtgcgccgtctat
aacccggattcgacgacactgggaatgaacacgaggttcactatatcggcggcggttacg
tgcaaaccatctacaatggagagacaaacgcaaacggaactatgtctgccaaagtggcga
cagtttttgtattgtctagcaggagacgacgctttcaggagacgaagggaaagagaagct
gctgggggctgtcgaaagcacggtgaacgaatcgagcgacacataaacagtgtttcgtac
atcgatcgagtcgccagaatcgtatttccggcttctttcggtcttcttaatgtttgttat
tgggtcgtttacgtcacgtgtcaagaggaattcaagtggcaggatccaccgatcggctct
atttaa
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