Venturia canescens: 122406848
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Entry
122406848 CDS
T09386
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
vcan
Venturia canescens
Pathway
vcan04080
Neuroactive ligand-receptor interaction
vcan04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122406848
04082 Neuroactive ligand signaling
122406848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcan04040
]
122406848
Ion channels [BR:
vcan04040
]
Ligand-gated channels
GABA-A
122406848
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122406848
NCBI-ProteinID:
XP_043268562
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All DBs
Position
2:3710924..3720394
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AA seq
503 aa
AA seq
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MGGRMSSSLAEFILTALLVHLGHLTAWGYLDSGGTAMSDRLENVTQTISRILDGYDIRLR
PNFGVAGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSHEEEVLTLSGD
FAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLD
SQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAELPQFTIIGYETNDRKERLATGIYQRL
SLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGV
RSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARAKKKTKKKEGDEKKATTL
TSGSKASSPFPGSTDADIIELQDLRMSPLPSIRSRSGIASGSGMSSSLGLRNEQHHDPAK
FPPSFRIARTAGYNVHGRNSGLRYRGPRQNKPKVLHAIRRGASVLRASMPKIKDVNVIDK
YSRIIFPVSFMLFNAVYWIFYVL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtaggatgtcgtcgtccctcgccgaatttatcctgacggctctgctcgtccat
ttgggtcacctcaccgcatggggttatctcgattccggtggcacggcgatgtcggatcga
ctggaaaatgtgacgcaaacgatctcgcgaatcctcgacggctacgacattcgtctccgt
ccgaattttggtgttgcaggtgaaccattgctggttggtatggatctcacgatcgccagt
ttcgatgcaatatcggaagtaaatatggactacacgataacgatgtacttgaatcagtac
tggaaagacgagagactggcattttcccacgaggaggaagttctcaccttgagcggtgac
ttcgccgagaagatttgggtcccggacacctttttcgcgaacgacaaaaacagttttctc
cacgacgtgaccgaacgcaacaaactcgtgagactttcgggcgacggctctgtcacatac
ggaatgagattcaccacgacactggcgtgcatgatggaccttcattattaccccttggac
tcgcagaattgcacggtcgaaatcgaaagttacggttacacagtgctcgacgtggtcatg
tattggaaagaaacgcctgttcgtggcgtcgaggaagccgaattaccacaattcacgata
atcggttacgagacaaacgaccgaaaagaacgactggcaaccggcatataccagaggctc
tcgctgagcttcaaactccagagaaacatcggttacttcgtctttcaaacttatctgcca
agtatacttatcgtgatgttgagctgggtcagcttttggataaatcacgaagcgaccagc
gcgagagtcgctcttggtatcacaacggtgcttacgatgacgacgatatcgacgggcgtg
agaagctccctgccacgcataagctacgtcaaggctattgacatttatctcgtaatgtgc
ttcgttttcgtattcgcggctcttttggagtacgccgcggtaaactacacttattgggga
gcgagagcgaaaaaaaagacgaagaagaaagagggcgacgagaagaaagcgacgacgctc
acgtctgggagcaaagcgagttcaccatttcctggatcgacagacgccgatataatagaa
ttgcaagatctccgaatgtcaccactgccgagcatcagaagcaggtccggaatcgcgagt
ggctcgggtatgtcgagttcgttaggacttcggaacgagcagcatcacgacccagccaaa
tttccgcctagctttagaatcgcgagaaccgccggttacaatgtccacggtaggaacagc
ggtctgagatatcggggaccgaggcaaaataagccaaaggtactgcacgcgatccgtcgc
ggagcctcggtgctccgagcctcgatgccaaagatcaaggacgtgaacgtgatcgacaaa
tattcgaggatcatatttcccgtgagttttatgctcttcaacgcggtatattggatcttc
tacgtgctgtga
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