Venturia canescens: 122406859
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Entry
122406859 CDS
T09386
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
vcan
Venturia canescens
Pathway
vcan03030
DNA replication
vcan03410
Base excision repair
vcan03420
Nucleotide excision repair
vcan03430
Mismatch repair
vcan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122406859
03410 Base excision repair
122406859
03420 Nucleotide excision repair
122406859
03430 Mismatch repair
122406859
03440 Homologous recombination
122406859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcan03032
]
122406859
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122406859
Enzymes [BR:
vcan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122406859
DNA replication proteins [BR:
vcan03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
122406859
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
122406859
MMR (mismatch excision repair)
DNA polymerase delta complex
122406859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
122406859
NCBI-ProteinID:
XP_043268575
EnsemblRapid:
LOC122406859
LinkDB
All DBs
Position
2:14795216..14802288
Genome browser
AA seq
1097 aa
AA seq
DB search
MNKGSFTASPVPAKKAKFGDDDDDLGRTFEAELADMDYDDDDFNVTHITGEPSTSRQINS
VKPVIGPESKTTCEKWSRPAPPPLNPSKNSLTFQQIEVDHYVGTHLAGMPGSNVGPVPIM
RMFGVTWEGNSVCCHVHGFCPYFFVTAPPKFTNEHCKPFKDALNTAVKKDMRSNPDNVQD
AVLAVELVYKQTVYGYAGTEKSPFLRITVALQKLVAPSKRLIESENIYPAFYHDYRAFES
NIDFDIRFMVDTNVLGCTWIELPANSWRFHVQSTTRCQIEVDVAWDAFIAHAPEGEWSKV
APFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGEPEPFIRNIFTLDTCAPIVGCQ
VMSFGTEQLMLQKWAEFVRDLDPDIFTGYNINNFDFPYLINRANHLNVRDFSYLGRVKNI
KSVIKDQVLQSKQMGRRENKYVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKE
DVHHSIIADLQKGDAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLSSLL
TRGQQIKVVSQLLRKTKEKDYLIPVHTGQGSDEQFDGATVLEPKRGFYKDPIATLDFSSL
YPSIIMAHNICYTSLLGPKTVKQYNLQPDQYTVTPSNSYFAKASLCKGLLPEILENLLSA
RKKAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQQGKLPCLEISGSVTAYGRE
MIEKTKQEVETHYRCENGYAHNAVVIYGDTDSVMVNFGVKEIEEAMKLGREAAEYVTDKF
IKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVANMMNTC
LKKLLIDRNPEDALNYAKQIISDLLCNKVDISQLVITKELTKTDYTAKQAHVELAAKMKK
RDAGTAPKLGDRVPYVFISATKGTPAYMKAEDPIYVLENNIPIDTTYYLENQLSKPLVRI
FEPILGDRAESLLLKGEHTRTKTVVTSRVGALAAFTRKKEACIGCRAVLSADREKMALCK
FCETKEVEFYQKELATGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFYMRKKVQM
ELDTQTKRIERFGIPDW
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggaagtttcacagcttctccagtcccggccaaaaaggctaaattcggggat
gatgatgatgatcttggaagaacgttcgaagccgaacttgcggatatggattatgatgat
gacgattttaacgtaactcacattactggagagccttcaacaagtcgacaaataaatagt
gtcaaacctgttataggacccgaatccaaaaccacttgtgaaaaatggagtcgaccggca
ccacctccgctaaatccaagcaaaaattctctcactttccaacagattgaagtcgaccat
tatgttggtacccacctagcagggatgccaggtagtaacgtgggaccagtaccaataatg
agaatgttcggagttacttgggaaggcaactccgtttgttgtcacgtacatggtttttgt
ccctattttttcgtaaccgcaccaccaaaattcactaacgaacattgcaaacctttcaag
gatgctcttaacactgcggtcaaaaaggacatgagatctaatcccgataatgtacaagat
gctgttttagcagtagaacttgtatacaagcagactgtttatggatacgcaggaacagag
aaatcaccatttttgcggataaccgttgcactacaaaaacttgtcgcaccttccaaaagg
ttgatcgagtcagaaaacatatatccagctttttatcacgattatcgagctttcgaaagc
aacatcgattttgatatacgatttatggttgataccaatgttctcggatgtacatggatc
gagttgccggccaacagttggcgatttcacgttcaatcgacgacccgatgtcaaatcgag
gtagacgtcgcttgggacgcttttatcgcacatgcacctgagggtgaatggtccaaagtg
gcgccgttcaggattctcagttttgatatcgaatgcgctggtcgcaaaggtatatttccc
gaaccaaaccatgatccggtcattcaaatcgcaaatatggtcataaaacagggcgaacca
gagccatttattcggaatatttttaccctcgatacttgcgctccgattgttggatgccaa
gtcatgagcttcggcactgaacagctaatgttacagaaatgggccgagtttgtgcgcgat
ttggatcctgacattttcaccggatacaacatcaacaatttcgattttccgtatcttata
aaccgagctaatcaccttaacgtcagggattttagttatctcggtagagtcaaaaatata
aaatctgttataaaagatcaagttcttcagagcaaacagatgggacggagagagaacaaa
tatgtgaactttgagggacgtgttccattcgatttgctactggttctcgtgcgtgattac
aaattgcgatcatataccctgaatgccgtaagttatcattttcttcaagaacaaaaagaa
gacgttcaccacagtattatcgctgatttgcaaaaaggggacgctcaaactcgtcgtcgc
ctggctgtttattgtttgaaagacgcgtacttgccacttcgattgctcgacaaactcatg
tgcattattatttacatggaaatggcaagagtcacaggagtctcgctctccagtttgctc
actcggggacaacaaatcaaagttgtttcacaacttttacgtaagacgaaagaaaaagat
tatttgatacccgtgcataccggtcagggtagtgatgaacagttcgatggcgcaacggtt
cttgagcccaaaagaggtttctacaaagatcccatcgctacgttggatttcagttctcta
tacccgagtatcataatggctcacaacatctgttacacgtctttgctcggcccaaaaacc
gtaaaacaatacaatcttcagcctgatcaatacaccgtgactccatcgaactcatatttc
gccaaagcgtccctgtgtaaaggtcttttgccagaaattctggaaaatttattgtcagcg
aggaagaaggcaaaggctgaattaaagaaagagactgatccgctgaaacaaaaagtactc
gatggtagacaatacgccttgaaagtctccgcgaattctgtttacggtttcacgggtgct
cagcaaggaaaactgccttgcttggaaatatctgggagtgtcacggcttacggtcgagag
atgatagaaaaaacaaaacaggaagtggaaactcactacagatgtgaaaatggttatgcg
cacaatgcggttgtaatttacggtgacacggattcggtgatggtgaattttggagtcaaa
gaaattgaagaagctatgaaacttggaagagaagctgctgaatatgtaacggataaattt
atcaaacccataaagctagaattcgagaaggtttattttccttatcttcttataaacaaa
aaacgttatgccggactttacttcacgagacccgacaaatacgacaaaatggattgtaag
ggattggaaactgtgcggagggacaattgtcctttggttgcaaatatgatgaatacgtgc
ttgaaaaaactactcatcgatcgaaacccggaggatgctttgaactacgctaagcaaata
atcagcgatttgctttgcaacaaagttgacatatcgcagttggtcataacgaaagaattg
acaaaaacggattacacagcgaaacaggctcacgttgagctggcagcaaaaatgaagaaa
cgtgacgccgggacagcgcctaaactcggtgaccgtgtaccgtacgttttcataagcgcg
accaaaggcacaccggcttacatgaaagccgaggatccgatttacgttctagaaaacaac
attcctatcgatacgacgtattatttggagaatcagttgtcgaaacctctggttcgaata
tttgaaccgattctcggtgacagagccgagtctcttttgctcaagggagaacacacgcgc
acaaagactgtagttacatcgagggtcggggctctcgcagctttcacacgcaaaaaagaa
gcttgcattggatgtcgcgcagttttgtcggcggatcgtgaaaaaatggcgctctgtaag
ttctgcgaaacgaaggaagttgagttttaccaaaaagaattggctacggggcggaaactg
gaagaaaagttttgtagattgtggaccgagtgccaaagatgtcagggaagtcttcatcaa
gaagttctatgcacgagccgtgattgcccaattttctatatgaggaaaaaagtccaaatg
gagctggatacgcaaacaaaaaggatcgagagattcggaattccggactggtag
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integrated database retrieval system
