Venturia canescens: 122406866
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Entry
122406866 CDS
T09386
Name
(RefSeq) high mobility group protein DSP1-like
KO
K10802
high mobility group protein B1
Organism
vcan
Venturia canescens
Pathway
vcan03410
Base excision repair
vcan04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122406866
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122406866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122406866
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122406866
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcan04147
]
122406866
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
122406866
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122406866
MMR (mismatch excision repair)
Other MMR factors
122406866
Exosome [BR:
vcan04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122406866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
122406866
NCBI-ProteinID:
XP_043268587
LinkDB
All DBs
Position
2:14740787..14755731
Genome browser
AA seq
418 aa
AA seq
DB search
MSEHHRVAGGWGTASSGNREDGSSGPAWWPTGLNAEQQQQQAAAAAAAAQQQQQAQQQAQ
QQQAQQNLHQHLLNQQQQQLSQHHQDIVRSTAAATQQLFSYKMASSFQNPATTGAQSSPV
STSSPVGSCMRGATGGGYDYRLGVGGTPSSGGGGGGGGGGGGGGGGGPAGAPPGVQWWYP
GGVMDGGQNNLHQQQMQQQGQHLSPITSQTSTPPVMSPHQIQQLPQQQNNLQQNKMPRGK
TTDTKPRGRMTAYAFFVQTCRQEHKKKHPEENIVFQEFSRKCAMRWKTMSDKEKKRFHEM
ADKDKKRYDAEMQNYTPPKGEKTTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKML
NPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYERESTAYKKKMADATGEIL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacaccaccgcgttgccggtggctggggcactgctagctccggaaatcgggaa
gacggctcgagcggaccggcatggtggccaacgggtttgaacgccgagcaacagcagcag
caagcggccgccgccgccgctgccgcgcaacagcaacaacaagcacaacaacaggcgcaa
caacaacaggcacaacaaaatttgcatcagcatctgcttaatcaacaacagcaacaattg
tcacagcatcatcaggatattgtgagaagcacagcggcagcgacccagcaattgttctcg
tacaagatggcctccagcttccaaaatccggcgacgacgggagcccagtcgagtccggta
tcgacatcgtcgccggttggctcgtgcatgagaggcgccaccggtggtggttacgattac
agactcggtgtcggtggtacaccgagttccggtggcggcggcggaggcggcggcggcggg
ggtgggggaggcggcggaggacccgctggtgcaccacccggtgtacaatggtggtatccc
ggtggagttatggacggtggacagaacaaccttcatcagcagcagatgcagcaacagggc
caacatctatcgccgatcacttcgcaaacttctacgccccccgttatgtccccgcatcag
atacaacagctaccacagcagcaaaataatctacaacaaaataaaatgccgagaggaaag
acaacagacacgaagcccagggggcgaatgaccgcttatgcgttcttcgttcaaacatgc
cgtcaggagcacaagaagaaacacccggaagagaacatcgtcttccaggagttctcgaga
aagtgcgccatgaggtggaagacaatgtccgataaggaaaagaaacgtttccacgagatg
gcagacaaggacaagaagagatacgacgctgaaatgcagaattacacacctccgaaggga
gagaaaacaaccggccgaggcaagaaacgcaaacacatcaaggatcccaacgcgcccaaa
agatcattgtcagctttcttctggttctgtaatgacgagcgtggcaaggtcaagatgctg
aatcccgaatatggagtaggagatatcgctaaagaattgggcaagaagtggtcagacgcc
gatcccgaaaccaaatccaaatacgaggctatggcagaaaaggacaaagctcgatatgaa
agggaatcgactgcatacaagaagaaaatggcggacgcaacgggagaaattttatga
DBGET
integrated database retrieval system
