Venturia canescens: 122406965
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Entry
122406965 CDS
T09386
Name
(RefSeq) protein trachealess isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122406965
Transcription factors [BR:
vcan03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122406965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
HLH
PAS_4
eIF-3_zeta
DUF702
SpoIIP
DUF6591
EOS1
NatA_aux_su
DUF4638
MDM10
Motif
Other DBs
NCBI-GeneID:
122406965
NCBI-ProteinID:
XP_043268777
LinkDB
All DBs
Position
2:14548982..14708924
Genome browser
AA seq
1008 aa
AA seq
DB search
MSGAPGFHWGAMIAGHHAAAAAGMMQPPLSGVGDYGLGTAHHPTGHPAMPMDLHVPQQGF
PCYRYRDDALCWTDRKPSMDDVGNPTSVNARLLEMRKEKSRDAARSRRGKENFEFYELAK
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGRGDPPWNRDPPPCNKIVLKGAKRSRLTS
APLAEDMFEQHQGTHILQSLDGFAMAVAADGRFLYISETVSIYLGLSQVEMTGSSVFDYV
HQQDHVEVAEQLGLGLTSSSNSSGPHSSSSGLASPSSAASEEHGSASTANPDVSSVMSLT
TAGVYKGYDRAFCVRMKSSLTKRGCHFKSSGYRVVLLLCRLRPQYPFSRTGKSSPPLMGM
VGLAIALPPPSVHEIRLETDMFVTRINFNFKIAHCEPKVSELLDYTADELAGKSLYALCH
GEDAHRLRKSHVDLLHKGQVLTHYYRLMNKSGGYTWLQTCATIVCNSKNAEEQNIICVNY
VVSGREYGNLIMDCCQLEDGVTGVKREDVAGNDPENGSPDADRGEGRTSGGPTNQHPENP
HRSPPEDREDTRGSESEQRGNRHHDNVSQLQQEPGPAVPTIGVLTVKSLSRGHKRKYAQE
EESSSGEEDEEEEAAGAGAGAGAVSGKTSVGAVRSNALSPASSSHSVPGSEQVLRAPSPK
LRRSEGACGGEGGEVAGGTSVKDLEQAMSKHLPGATLNKPDSPALHHQPTDFSTDALLKQ
QQQRSTIQWIGAHHHHLGHLSPQQSSTAPLPASALLRQLYVNRESVIRANVHGITSGGGR
GPSASGGAYYTGDSVQTGPLPTPPGSEGSSTYGEHQFVLGAHNPQKSVVGTSGAEAFTSL
VSSYSSAAAGYAIDYHSAMTPPSSVSPRDKQQQHHQQQHQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQLHSASVVSSYESSVYGDPILRHQYEPAQPLPLKPQVYSAAVHPS
ALDAAAAYASASLSEQPQFYHHPAAGAGFHLYHPTNKTATNGWYSSAS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagcacccggttttcactggggcgctatgatagccggtcatcacgcggccgct
gccgcgggtatgatgcaaccaccgttgtccggtgttggtgattacggactcggtacggct
catcatcccaccggacatccggcaatgcctatggatctacacgtgcctcaacaaggattc
ccttgctacaggtatcgcgacgatgcgctctgctggacggacaggaaaccctccatggac
gacgtgggcaacccgacttccgtcaacgctcgtttactggagatgcggaaagagaagagc
agagatgccgcaagatcacgccggggtaaagaaaatttcgagttttacgaacttgcgaaa
atgctaccactcccagctgccataacttcacaactcgacaaagcctcgatcataaggctc
accatatcctacctcaagttacgagacttttctggaagaggggatccgccttggaaccgg
gaccctccaccgtgcaataaaatcgttctcaaaggagctaaaaggtcgaggctcacgtca
gctccgttggcagaggacatgttcgagcaacatcagggcacccacattcttcagtcgctg
gacggttttgcgatggcggtcgccgctgatggacgattcctgtacatttccgagaccgtc
tccatttacctcggcctttcccaggtggaaatgaccggctctagcgtattcgactacgtt
catcaacaggaccacgtcgaggtcgctgaacaactgggtctcggattaacctcgtcctcc
aactcgtccggacctcattcctccagttccggacttgcgtcaccgagcagcgctgcttcg
gaagaacacggttcggcatcaaccgccaatcccgacgtctcatcggttatgtcgctaacg
acagcaggcgtttacaaaggctacgaccgagcgttctgcgtccggatgaaatcatcttta
acgaaacgcggatgtcacttcaagtcttctggttatcgggttgttcttctcctgtgtcga
ttaaggccccagtatccatttagtcgaacgggcaaatcgtcgccaccgttgatgggtatg
gtcggcttggcgatagcattaccaccaccaagcgttcacgaaattcgacttgagactgac
atgttcgttacgaggatcaactttaactttaagatagcacactgcgaaccaaaagtatca
gaactgttagattacacggcggatgaattagcggggaagagtctttatgccctgtgccac
ggggaagacgcacatcggctacgaaaatcgcacgtcgatctgcttcacaaaggccaagta
ctcacgcattattatcgacttatgaacaagagcggcggttacacgtggctacaaacttgc
gccactatcgtgtgcaattcgaaaaatgctgaggaacaaaatatcatttgcgttaattac
gttgtcagtggtcgagagtacgggaatctcataatggattgctgccaattagaggatggg
gtcacaggtgtcaagagagaagatgttgccggtaacgatccagaaaacggctcgccagat
gcggatagaggagaaggtcgaacaagcggtggtccaacgaaccagcatccggagaatcct
caccgttcgccgccggaggaccgcgaggatacgcgtggttcggagagcgagcagcgagga
aaccgtcaccacgacaacgtgtctcagcttcaacaggagccgggtccagcggtgccgacg
atcggtgttctgacggtgaagtcattgtcgcgagggcacaagaggaagtacgctcaagag
gaggagagtagttcgggtgaggaggacgaggaggaggaggcggcgggggcgggggcgggg
gcgggggcggtatcagggaagacgtcggtgggtgcggtgcggagcaacgcgttgagtcca
gcgtcctcgagtcactcggtaccgggaagcgagcaagtgttgagggcgccgagtccaaag
ttgcgaagatcggagggtgcttgcgggggggaaggaggcgaagtggcgggtggaacatcg
gtcaaggatttggagcaagcgatgtcgaagcatctgccgggtgcaacgttgaacaagccg
gattcaccggcgttgcatcatcagccaacggacttcagtacggacgcgttgttgaagcag
cagcagcagaggagcacgatccagtggatcggagcgcaccatcatcatttgggccacctg
agtccgcagcagtcgtcgacggcgccgctcccggcgtcggcgttgctccgacaattgtac
gtaaacagggagagtgtcataagggcgaacgtgcacggcataacgtcgggagggggtcga
gggccttcggcatccggaggcgcttattacaccggcgacagcgtgcaaaccgggccattg
ccaacgcccccgggatccgagggttcttctacgtacggagaacaccagttcgtactcggg
gctcacaatccccagaaaagtgttgtaggaacgagcggtgccgaggctttcacgagcctc
gtctcgtcttactcatccgctgcggctggttacgcgattgattatcactcggcgatgacc
ccaccgtcttccgtctcaccgcgggacaagcaacaacagcatcatcagcagcagcatcaa
cagcagcagcagcagcagcaacaacaacaacaacaacaacaacagcagcaacagcaacag
caacaacagcagcagcagcagcaacagcaacaacagcagcaacaacaacttcactcagcg
agtgtcgtcagcagttacgaatcatcggtttacggtgatcctatcttgagacatcagtac
gagcctgctcaacctctacccttgaaacctcaggtctattccgccgctgttcatcccagc
gctcttgatgctgctgccgcctacgcttcggccagcctcagcgaacagccccagttctat
catcatccggctgccggcgccggtttccacctctatcatccgaccaacaaaaccgcgacc
aacggatggtacagctccgcgtcctag
DBGET
integrated database retrieval system
