KEGG   Venturia canescens: 122407024
Entry
122407024         CDS       T09386                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
vcan  Venturia canescens
Pathway
vcan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122407024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcan03019]
    122407024
Messenger RNA biogenesis [BR:vcan03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     122407024
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     122407024
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 122407024
NCBI-ProteinID: XP_043268906
LinkDB
Position
2:12567568..12569417
AA seq 277 aa
MELDQVQDQGGLRIDGRRPLELRQIRVKLGVFRQADGSAYLEHGNTKILAAVYGPHQPRG
AAARNTANKSTKGIINCQYSMAVFSYTAGERKSRPRGDRKTQERCTQLRHAMEAILNLEQ
FPRSQIDIFIEVLQVDGSDYCASVNAATLALIDAGIPIKDYAIGCTITLPDSSASYEEED
ARGIGILDANFLEENGPGVTLSIVALPETSNEASKESGLIVVAQGSGQRLHLSRLEPMKV
RALTGCRDIKVILDRAVRQHLNANSLPSLFNVHTLVD
NT seq 834 nt   +upstreamnt  +downstreamnt
atggagctagatcaagttcaagatcaagggggtttacgcatagacggcagacgacctctt
gaattgcggcaaattcgcgttaaattgggagtttttcgacaggcggatggaagcgcctat
ttggaacatggaaatacaaaaatactcgctgctgtatacggtcctcatcagcctagaggg
gcagccgcacggaacacagcaaacaaatcaaccaaaggaataataaattgtcaatacagt
atggcagtgtttagttacactgctggtgaaagaaaaagcagacctcgaggtgacagaaaa
acacaagagagatgtactcaactgagacatgcaatggaggcgatattgaatttggaacaa
tttcctcgatctcagattgatattttcattgaagttttacaagttgacggcagcgactat
tgtgccagtgtcaatgctgctactttagctctaatcgatgctggaatacccatcaaagat
tacgcgataggatgtacgataacattgccagattcgtcagcatcgtacgaggaagaggac
gctcgaggaatcggtatactggacgcaaattttttggaagaaaacggtcccggtgttaca
ctttcgatagtcgctcttccagaaacgagcaacgaggcgtcgaaagaatccggtcttatc
gtggttgcccagggttccggacaacgattgcacctttctcgtctcgaacccatgaaagtt
cgtgcattgactggatgtcgggacattaaagttattttggaccgcgcagtacgacaacat
cttaacgcaaattcgttaccatcattgttcaatgttcacacattggttgactga

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