Venturia canescens: 122407049
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Entry
122407049 CDS
T09386
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
vcan
Venturia canescens
Pathway
vcan04150
mTOR signaling pathway
vcan04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122407049
04150 mTOR signaling pathway
122407049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcan04131
]
122407049
Membrane trafficking [BR:
vcan04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122407049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
EGF_LRP2
Vgb_lyase
DUF2605
FAT
Motif
Other DBs
NCBI-GeneID:
122407049
NCBI-ProteinID:
XP_043268951
LinkDB
All DBs
Position
2:complement(19842678..19877489)
Genome browser
AA seq
1607 aa
AA seq
DB search
MAFGKFLSFFAACILCSIAAGYGSPTLLFATHKDIRVANVSRGNKVATLVKDLSQGAALD
FYWERRLVCWSDSGLEMIQCVHTNGTSVGERMTVVNSSLISPDGLACDWYTGKLYWTDGD
KNRIEVTSIDGKHRKVLFWTEIYEPRAIALVPMRSIMFWTDWGDVPKIEKASMNGDPSTR
EVIVSDDIFWPNGITVDYENELIYWADGRLRFIAVMDYDGNNRRKVVSQGLDYPFAITFF
EQRLYWTDWKTWCIHSHDVRSSTQSPHPRELFHGEYIPGDIEVWDPRRQPHLDNPCIHDN
GNCSHLCLLSSKEPGYSCACPTGVKLVDNYTCAKGPQEVLLIVQRNAICKLSLDSPDYTN
FVLPLTGIKYAIAIDFDPVDEMLYWTDEKVCAIRRAYLDGSGQEDVVTTEVSNPDGIAID
WIARNMYWSDTGTDRIEVARLNGTSRKVLINEDLIEPRAIALAPELGWMFWTDWNEKRPK
IERSNLDGSERTLLITKDIVWPNGIALDLDRKKIYWCDASMDKIEVCNMDGTDRREVITD
NLPHLFGLSLLGDYLYWTDWQRRSIDRAHKLTGGEREVIVEQVPNVMGLKAVHLGRVRGS
NPCARNNGGCTHLCLNRPGNNYVCACQIDYELIRDKKTCVIPDAFLLFSRKDKIGRISIE
NPNNDNIIPVTGVKDASALDFDMQNHIYWTDVKLKAVTRAFRNGSDVERIVDLGLETPES
LAVDWIAHNLYWTDTGTRRIEVVRLEGCSRKVLIWQDLVEPRCLALDPERGHMYWSEWGK
SGSIERAGLDGSRRQIILSNVGRANGLTIDHSARILYWADLFTPAIDSYDLQTGKRKAII
TQDIVYPFSITQYQDYIYWTDWNTGDIERAYKTNGSNRTKIHDRLESVTDLLVFHHSRQS
GSNPCSVRNGDCSHLCIALPEPGGRNSVTRKCACPTHYNLAPDNKTCVGPKNFMIYSLRN
VMGRFLPDVNDCPDIVLRVQGLKNVRSIEFDPITQHIYWIDGRTMSIRKAMENRTHASVV
VSGGSGHPFDLALDPLGRLLFWSCAENDAINVTRLDNGSSLGVVVKGDGEKPRNLAVHPE
KRLLFWCDIGGKMRIMRSTMDGKERVVVASDLDQPTGLAVDTIGNMIFWSHGRQIEVSDL
SGTNRRVLINVEQSSIAYLSVLNDFVYWYDRETQVVSRVNKINGTSRKSMMNRLLTDLVT
VRTPDDHLMESHICSPFHDYGGCSHFCIGTTASRCSCPQYLVLSDDERTCRAAPACGPDA
FTCAHSSSAVAKECIPAEWKCDRRTDCTDGSDELGCPSCGEDQFKCQSGHCIDMAWVCDG
VHQCQDGSDESHCCEPGQFRCTGTPLCISGTALCDGWAHCADGSDEKAPVCAAANNRRQD
VSPATDAGKSTYVIAILVVLGVTGVAILGFFYCRRRLVANEELPDILHDSAGDPLSPKST
RSGKPMLSQKNGAKDLKAGLKTVRMSTLTGSSIGSSYDRSHITGASSSTRGSSACGYPQE
TLNPPPSPATTANSTRCSSSNASRYRPYRHYRSINQPPPPTPCSTDVCDESDSTYPARYR
YEIEPFPPPPTPRSVYHSDAALSCPPSPSSRSSTYFSPLPPPPSPVP
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgggaaattcctaagtttcttcgctgcttgcatcttatgcagtatcgcagcc
ggctatggatcaccgacgctgctgttcgccactcacaaagatatccgcgtggcgaatgta
tcgcggggcaacaaggtggcgactctcgtgaaggatctttcgcagggtgcagcgttggat
ttttattgggagcgtcgtttggtttgttggtccgacagcggtttggagatgatccaatgc
gtgcacacgaacggtacgagcgtcggggagcggatgacggtcgtaaattcgtcgttgata
tcgccggacggtttggcgtgcgattggtacacgggaaaattgtattggacggacggtgac
aagaatcgtatcgaagtaacgagcatagacggcaaacacaggaaagtattattctggacg
gagatttatgagccgagggcaattgctttggtcccaatgaggagcataatgttttggacg
gattggggggacgtgcccaagatcgagaaagcctcgatgaacggtgatcctagtacgcga
gaagtcatagtttcggacgacattttttggccgaacggtataacggttgactatgaaaac
gagctgatttactgggcggacggtagattacgtttcatcgcggtgatggactacgacggt
aacaacagacgaaaagtcgtcagccaaggcttggattatccgttcgcgataaccttcttt
gagcagcgtctctattggaccgactggaaaacgtggtgcatccattcccacgacgtacgt
tcgagcacgcagtcgccgcatccacgagagctcttccacggcgaatacatacccggggac
attgaagtctgggacccccggcgacaaccccatttggacaacccttgcatccacgataac
gggaattgctcgcatctgtgcttgctcagcagcaaagagcccggttatagctgcgcttgt
ccaaccggtgttaaactcgtggacaattacacgtgtgccaaaggaccccaagaggtgtta
ttgatcgtccagcgtaacgccatttgcaagctctccctggattcgccggactacacgaat
ttcgtattgccacttaccggcattaagtacgcgatcgctattgactttgatccggttgac
gagatgctctattggacggatgaaaaagtgtgcgccatcagacgagcctacctcgatggg
agcggacaggaggacgtcgtcactaccgaagtctcgaatccggatggaatcgccatcgat
tggatcgccaggaacatgtattggtccgacaccggcaccgatcgcatcgaagttgcaagg
ttgaacggtaccagtagaaaagtactcatcaacgaggatctcattgagccacgtgcgatc
gcactcgcgcctgaactcggttggatgttttggaccgattggaacgagaaaaggccgaaa
atcgagcgcagcaatctcgatgggagcgagcgaacgctcctcataaccaaagacattgtt
tggcctaacgggatcgctctcgacctcgatcgcaaaaagatttattggtgcgatgccagt
atggacaaaatagaggtgtgcaacatggacgggaccgatcgccgggaagtcatcaccgac
aatcttccccacttgttcggattgagcctcctcggcgattatctgtattggaccgattgg
caacgacggagcatcgaccgagctcacaaattaaccggtggcgaacgcgaggtcatcgtt
gaacaagtgcccaatgtcatgggactcaaagctgttcatcttggacgggtacgcggcagc
aatccttgcgctcgtaacaacggcggctgcactcatctctgcctcaacagacccggaaat
aactacgtttgcgcctgccaaatcgattacgaactcatcagggacaaaaagacttgcgtc
atacccgacgccttcttgttgttctcaaggaaagacaaaatcggacggatcagcattgaa
aatcctaacaatgacaacatcattcccgtcaccggtgtcaaagatgcgagcgcccttgac
tttgatatgcagaatcacatctattggactgatgttaagctcaaagctgtcacccgagcc
ttcagaaatggttccgatgtcgaaaggatcgttgatcttggcctcgaaacaccggagagt
ctcgcagtcgattggatagctcacaatctttattggaccgacactggaactcgtagaatc
gaagtcgttaggttggagggttgcagtcgtaaagttctcatatggcaggatctcgttgaa
ccgaggtgcctcgctctcgatccggaaagagggcacatgtattggagcgaatggggaaaa
agtgggagcatcgaaagagctggtttggatggttcacgacgacagataatactgtcgaac
gttggtcgtgccaacggattgacgatcgatcactcagctcgaatattatactgggcggac
ctttttactccagctatcgacagttacgatcttcaaacgggaaagagaaaagctataata
acacaagacattgtatatcccttcagcataacgcagtatcaggattatatttattggacc
gattggaacaccggtgacatcgaaagagcctacaaaacgaatggatccaacagaacgaaa
atccatgatcgtctcgagtccgtaaccgatcttcttgttttccatcactctcgacaatct
ggcagtaatccatgctccgtcagaaacggcgattgcagtcatttgtgcattgctcttccc
gaacccggtggcagaaattctgttactcgcaaatgtgcttgtccgactcattataatctt
gcaccggataacaaaacttgtgttggtccaaagaattttatgatctacagtctgcgaaac
gtgatgggtcgttttttaccggacgtgaatgactgtccggacatagtgctgcgcgttcaa
ggcttgaagaacgtaagatcaatagaattcgatccaataacccaacacatatattggata
gacggtcgaacgatgtcgatacgcaaagctatggagaatcgaacacacgcgtcagtggtg
gtttctggtggttcgggacatcctttcgacttggccctagatccactgggtcgattgctg
ttctggtcgtgcgcggaaaatgatgctataaatgtaacgagattggacaacggttcgtcg
ctaggtgtcgtagttaagggggacggtgagaaaccccgtaacttggctgtacatccggaa
aaaagattgttattttggtgcgacattggtggcaaaatgagaataatgcggagtactatg
gacggcaaagaaagggtcgttgtagcgagcgatctcgatcaacccaccggtttggcggtc
gataccatcggtaatatgattttttggtctcacggacgtcaaatcgaagtttctgatttg
agtggaaccaatcgacgcgttctcatcaatgtcgaacagagttccatcgcttacttgtcc
gtgctcaacgatttcgtttactggtacgatcgcgagactcaagttgtctcgcgcgtcaat
aaaattaacggaacctcacgtaaatcgatgatgaatcggcttctcaccgatctggttact
gtacgaactcccgatgatcacctcatggaatctcacatatgcagcccctttcatgactat
ggtggctgctcccatttttgcatcggcaccaccgcgtcccgatgctcgtgtccacaatat
cttgtcttatcggacgatgagagaacttgccgcgctgcgcccgcttgcggtcccgacgct
tttacctgcgcccattctagttccgccgttgccaaagaatgcatcccggctgaatggaaa
tgcgatcgacgtaccgattgcaccgacggcagcgatgaactcggctgtccgtcttgcgga
gaagatcaattcaaatgtcaaagtggtcactgcatcgacatggcttgggtatgcgatgga
gtccatcagtgtcaagatggttcggacgaaagtcattgttgtgaacctggccaatttcgg
tgcacgggtactcctctctgtatttcagggacggctttgtgcgacggctgggcacattgt
gccgacggcagtgacgaaaaagctccggtatgcgcggccgcgaataaccgtcgtcaggac
gtcagtccagcgacggacgccgggaaaagcacttacgtcatagcgattctcgtcgttctc
ggtgttaccggggtcgcgatactcggtttcttctactgtcgtagaaggctcgttgccaac
gaagaattgccggatattttacacgactcggcgggtgatccgctctcacccaaatcaact
agatcgggaaaaccgatgttgtcccaaaaaaatggcgccaaagatctcaaagctggtctc
aaaactgtcagaatgtccactttgaccggaagtagcatcggctccagctacgatcgcagt
cacatcacaggtgcatcgagttcgacgagaggaagttccgcctgtggatatcctcaagaa
actctaaatccaccaccgagtccagcgacaactgccaattccacaagatgttcgagcagc
aacgcctcccgttatcgtccttacagacactaccggagtatcaatcagcctccgccgcca
acgccttgcagtaccgacgtatgcgacgaatcggacagtacttatccagctcgttatcgt
tacgagatcgagccatttccacctccgccaacgccacgttccgtttatcacagtgacgcg
gcactcagttgcccaccttccccaagttcccgatcctccacttatttcagtcctttacca
cctccgccttcacccgtaccgtga
DBGET
integrated database retrieval system
