Venturia canescens: 122407083
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Entry
122407083 CDS
T09386
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122407083
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122407083
Spliceosome [BR:
vcan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122407083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
CMS1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122407083
NCBI-ProteinID:
XP_043268998
LinkDB
All DBs
Position
2:complement(3282793..3286952)
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AA seq
706 aa
AA seq
DB search
MNEGWNSDEDRAGNPIVSQQYTNTDRYHNSDRSRNQRNNRNRDYDGSQQSHQDSRRDNRK
GGQGQEDGLVIHIEQSKIGKLIGRGGSKIKELERDSGARINIDKSYGNDTAAVTLVGSEE
AQNKAKELIDELMSEDRQYGSGGGGGRQWGSGNRGGGRQNTYDQKKNYDSQQGGNSAPVE
AFTEIDWEKANEAHARYQTERWANVGPILKEFYREDPVVANMSEDHVARIRKQNNNIECR
RVFDNVEEGGPENSFKVPNPVETFEQAFQDYPEILEEIRKQGFSKPSPIQCQAWPILLSG
KDLIGIAQTGTGKTLAFLLPALIHIDGQPVPRAERKGPNVLVMAPTHELALQIEKEVSKY
SYRGIRSVCVYGGGNRKEQSASVSKGVQIVIATPGRLNDLVQTGVLDVKSVTYLVLDEAD
RMLDMGFEPQIRKTLLDVRPDRQTVMTSATWPQGVRRLAQSYMKDPIQVFVGSLDLAAVH
SVRQTIHLVTDEEKTTMLYNFFQNMGENDKVIVFFGKKSRVDDLASELALSNVNCQSIHG
GRDQLDREQALEDIKNGSVKILLATDVASRGIDIEDITHVFNYDFPRDIEEYVHRVGRTG
RAGRTGESISLMARNDWSRAKELIRILEEASQEVPEGLYKMAERYEAMKEKKAQEKERDR
LDFGSYGERDRYGGGRDRYGGGSGGGGGGGGRDRYGGGGRRGGSRW
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaggttggaatagtgacgaggacagggcagggaatccaatagtttcccaacaa
tatacaaacactgacagatatcacaatagtgatcgttcaaggaatcagagaaacaatagg
aacagagactacgatggttctcaacaaagtcatcaagactccagaagagacaaccgcaag
ggtgggcaagggcaagaagatggtttagttatacatattgaacaatctaaaatcggaaaa
cttattgggcgaggcggctcaaaaataaaggaattggaaagagatagcggtgctcgtatc
aacattgataagtcttatggaaacgacactgcagcagtgacgttagttggttcggaagaa
gctcaaaacaaggcaaaagaactgattgatgagttgatgagcgaagaccgacaatacgga
tcgggaggtggaggaggaagacaatggggatcaggaaatcgaggtggtggtcgacagaat
acgtacgatcaaaaaaaaaattatgattcccagcaaggtggaaattcggcgccagtcgaa
gcgttcacggaaatagactgggagaaagcgaacgaagcgcatgcgagatatcagacggaa
agatgggccaacgtgggtccgatacttaaagaattttatcgcgaagatccagtggtagcg
aatatgagcgaggaccatgtagctcgtataagaaagcagaataacaatatcgaatgtcgg
cgagtgtttgacaatgtcgaggaaggaggccccgagaacagctttaaagttccaaatcca
gtggaaactttcgagcaagcattccaagattatcccgagatactcgaagaaatccgtaaa
caaggattttccaagcctagtcccatacagtgtcaagcttggccgatattattgagtggc
aaagatttgatcggtatcgctcaaactggcacaggcaaaactttggcttttcttttaccg
gctctgattcacatcgacggtcaaccagtacctcgtgctgaacgaaaagggccaaatgtt
cttgtcatggcacccactcacgaattggctttacaaatcgaaaaggaagtcagtaaatat
tcttaccgcggcattcgatccgtttgtgtctacggcggtggcaataggaaagaacagtcg
gctagcgtcagcaaaggcgttcaaattgtcattgctacccccggacggttaaatgatctc
gttcaaactggcgttctcgatgtaaagagcgttacttatctcgtacttgatgaagcagat
cgtatgttggacatgggattcgaacctcagattagaaaaactttactcgatgttagaccc
gatcgacagactgttatgaccagtgctacttggcctcaaggtgttcggagattggctcaa
tcctacatgaaagatccaatccaggtattcgttggttccttggatttagccgctgttcat
tcagtgcgtcaaaccattcacttggtcaccgatgaagaaaaaacgacaatgctgtacaat
ttcttccaaaacatgggagagaacgacaaggtaatcgtgtttttcggtaaaaagagtcga
gtggacgaccttgcgagtgagctggcactgtcaaacgtgaattgtcagagtattcatggt
ggaagagaccagctggatcgtgagcaagcgctagaggatataaagaatggatctgtgaaa
atacttttagcgactgacgttgctagtcgcggaatcgacatcgaggacataacgcacgtt
ttcaactatgattttcctcgcgatatcgaagaatacgttcatcgtgttggaaggacaggg
cgtgctgggcgtaccggtgaaagcataagtttaatggcacgaaacgattggtctcgagcc
aaagaacttattcgtattctcgaggaggcaagtcaggaagttcctgaagggctatacaaa
atggcagaacgttacgaagcgatgaaggagaaaaaagctcaagagaaagagcgcgatcgt
cttgacttcggttcttatggagaacgtgaccgttatggtggcggtagagaccgatacgga
ggtggtagcggcggtggcggtggcggtggcggcagggaccgttacggtggcgggggacga
agaggaggaagccggtggtag
DBGET
integrated database retrieval system
