Venturia canescens: 122407106
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Entry
122407106 CDS
T09386
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122407106
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
90S particles
Other 90S particles
122407106
Pre-60S particles
Other pre-60S particles
122407106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
UTP20
RIX1
TPR_24
Motif
Other DBs
NCBI-GeneID:
122407106
NCBI-ProteinID:
XP_043269034
LinkDB
All DBs
Position
2:6474098..6479849
Genome browser
AA seq
1300 aa
AA seq
DB search
MGKLGPRLNSRKKAKRWVKGQSSSSNPETKKHRDQARSRFFQENIGSKGLTTQALRQHDA
IQGTAPEKIEVDDEQGTVGASTFKTFDTFASDYSNCSNMSFSRFLNHFQSTSIIHKEMLA
ILAAVTDVIKQNGGTESTTEYYAALMTTLKTAETEESVAAILSLLGMGLKTIPKNVLKLQ
FSEASKTFFQVLTKYAASENFLILRHSIGCLSFLLRAQEAAVWSNASTQHVLDGILTFTV
HAKPKVRKAAQHAVCAILKGSDIMRADDAPAYHPAATQIAKHCLAQLENSGQPGSLTTTL
HVLTLLKDIAHQLPKTHVKSVCEALLRIMTLNNVLVTSCCLQTLHSLFVSRPLEAVLPSQ
LNAQIINALYDYQPAPGDTQPTLAWLAVMQEAHCNLVAYDVHLCAANIPRMIEKSTELWL
SDKSEVLTAASHTMKTLLQVCVAPLCATRELAKKYKTTLSKIFQLVQSGMKYRYNGAWHH
VLHLQAVLFQVAGKTCRDELSMTLVELADLRDSHKFTYNAEVEYAVGAAVKSMGPEVVLR
KIPLQGNEEIIDLKRSWLLPVLKDCTSQASIGYFLEFLFPMAAKCEKKSAELKTKNDGIG
AHSYELLYSQIWALLPSFCNNASDVQDNFKNIAKILGVAISSKKDLRISVMAALRKLITR
STEAGKTTDTEELARFAKNYLPLLFNLYTTKPNGSDEEGQRLAAFDTIKVYLPITSKELI
GELFDRALARLDETDNDDFTRQSIFDLIRVLTQYTDTERIQALYDKSAPILMDNKHQKEQ
KKAYRFLEEICANQSQICRDFVIENRRAIQKLLTNSASMAIPSSKAARLRCINHLIETHP
QIEKTKFLRSIVPEVILCIKEINEKCRNYAYQLLNTLADKLLKNPEDFGEYIEMLVAGLG
GSPSYCSATLLALASLTYRYNGAIGVATVHQVLQHACSLLTGPTREIALSALSFIKVYLS
AFPTTVIGPNLPQIVQALCGMTDDCKRHFRQKVRDILVKLVRKYSTEVIAGLIPASDETM
HKRLKNIRKIETRKQKSKEERGSKNEESSDEEFSVKRRPKSVEEILADSDEEFEDTEQTQ
DSGKKHKKSNKKQTWIQEAGDNIVDLVDPTAARNITATKPGQGTAKKQQAKAKDFGFKTA
GDGRLIIKDESDDDDSDGDTKKKKKKLPFLGSDSDDDMNDEDDAKSTVSAKPGQRKRKLS
GSTDAASTKAPSKYRAGGTGIHRPVKAPKTNEDFGADYRSRKAKGDVKKKGKPDPFAYVP
LTRAALNKRKKMKSAGRFKNIISGAKKGARIGSKGKRKLY
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctgggtccgcgtttgaacagtcgaaaaaaagcgaaacgctgggtaaaggga
cagagttcgagttccaatccagaaacgaaaaaacatcgtgatcaagcacgatcaagattt
tttcaagagaatatcggctccaagggactgaccacacaagctctgcgtcaacatgacgct
attcagggtaccgcaccagaaaaaattgaagtcgacgatgagcaaggaacggtgggagca
agcacgtttaaaacgtttgacacatttgccagcgactacagcaactgttccaatatgtcg
ttcagcagatttctaaatcactttcagtctacgtctatcatacacaaggaaatgttggct
atacttgcagcagtcaccgatgtcatcaaacaaaatggtggaaccgaatctaccaccgag
tattatgctgcactgatgacaacgctaaaaactgcagaaactgaggagtccgtagcagct
atactttctctgttgggaatgggtcttaagaccataccaaaaaatgtcctcaagcttcag
ttcagtgaagcaagcaagacattctttcaagtacttacgaagtatgctgccagtgaaaat
tttctgattctacgtcactcgattggatgcttgtcctttttgctcagagctcaggaagcg
gcagtgtggtcgaacgcctcgactcagcatgttctcgacggtatattaacgtttaccgtg
cacgcaaaaccaaaagttcgtaaagcagcccaacacgctgtgtgcgcaatcctcaaagga
agcgatataatgagagccgacgatgccccggcttatcatccagctgcgacccaaatagct
aagcactgtcttgcacaactggaaaatagcggacagcctggcagcctcacaacgacactc
cacgtcctcacgttactcaaggacatcgctcatcagttaccaaaaactcacgttaaatcg
gtgtgcgaagctcttcttcggataatgactctcaacaatgttctcgtcacgtcatgctgt
ttacaaactctacacagcttgttcgtgtctcgaccactggaagctgtacttccatcacaa
ttaaacgcacagatcatcaatgcgttgtacgattatcaaccagcaccgggcgatactcaa
ccgactttagcttggcttgctgtcatgcaagaagcgcactgcaatctcgtggcatacgac
gtgcatctgtgtgccgctaatattccccggatgatcgagaaatcaacggagctgtggcta
tcagacaagagcgaagtactgaccgctgcatcccacacaatgaaaactctcttgcaagtt
tgcgtagcaccgctttgcgcgacgagagagttagccaaaaaatataagacaacattgtcc
aagatatttcaactcgtacaatccggaatgaaatatcgttacaacggtgcatggcaccac
gttttacacctgcaggccgtacttttccaagtagctggtaaaacgtgcagagacgaattg
tccatgactctcgtcgagctcgctgacctgcgagattctcacaaattcacgtacaacgcg
gaggtcgagtacgccgttggtgctgcagtgaagtccatgggtccggaggttgttctgagg
aaaataccgctgcaaggaaacgaggaaataatagatttgaaacgcagttggctcttgccg
gtgctgaaagattgtacgagccaagcctcaatcggatatttcttggagtttctcttcccg
atggcggcaaagtgcgagaaaaaaagtgccgaattgaagacgaagaacgatggaatcggg
gctcacagttacgaattactctactcacagatatgggctttgcttccgagcttttgcaac
aacgcgagcgacgttcaagacaatttcaagaatatcgctaaaattttgggggtggcgatc
agctcgaagaaagatttgagaatatcggtcatggctgcgctgcgtaaattaataactcgg
tcgaccgaagccggcaaaaccacagacactgaagaattggcgcgtttcgccaaaaattat
cttccccttttgttcaatctttacaccacaaaaccaaacggttccgacgaggagggacag
cgtctcgcagccttcgacacgataaaagtttatttgccgataaccagcaaagaattgatc
ggtgaattgttcgatcgagctttagcacgactggatgaaacggacaacgacgattttacc
cgacagagcattttcgatctgattcgcgtcttgacccaatatacagatacagaaaggatt
caagcgctttatgacaaatctgcgccaattttaatggacaacaaacatcaaaaagaacag
aaaaaggcttacaggtttttggaagagatttgtgccaatcagagccaaatttgccgtgat
tttgtcatcgaaaatcgtcgggcaatccaaaaactattgaccaactccgcctcgatggct
atcccttcgagcaaggccgctcgattgcgttgcatcaatcacctcatcgagacacatcca
caaatagaaaaaaccaagttcttgcgctctattgtgcccgaggtcattctatgtattaag
gaaattaacgaaaaatgtcgaaattatgcttaccaattgttgaacacactcgccgataaa
ctgctgaaaaatccggaagattttggcgaatacatagaaatgctcgttgccggtctcggt
ggatcgcccagttattgcagcgcgactctcctcgctttggcttctctgacttacaggtac
aacggtgccatcggagtcgcaacggtgcatcaagttctccagcacgcgtgttcccttttg
actggaccgaccagggaaatcgctctctcggctctcagtttcatcaaagtttatttgtcc
gcgtttccaacgaccgtcatcggtccaaatttgccacaaatagtgcaagccctttgcggt
atgaccgacgactgcaaaaggcacttcaggcaaaaagttcgtgacatactggtcaagcta
gtgagaaaatacagcaccgaagtgatcgccggattaataccagcctccgatgagacgatg
cacaagaggcttaagaatattcgtaaaatcgaaacgagaaagcaaaaatccaaggaggag
cgaggatccaaaaacgaagaatcgagcgacgaagaattcagcgttaagaggagacctaaa
agcgtcgaagaaattttggctgatagcgacgaagagttcgaggacaccgaacaaacacaa
gattctggaaagaagcacaaaaaatcgaacaaaaaacaaacttggattcaagaagctggc
gataatatcgttgacttggtggatcccacagctgcgagaaacatcacagccactaagccc
ggccaaggaactgcaaaaaaacaacaagcgaaggcgaaagattttggtttcaaaactgcc
ggtgatggtcgtcttattatcaaagacgaaagcgatgacgacgatagtgacggagacacc
aaaaagaagaaaaagaaattgccattcctcggcagcgattctgacgacgacatgaatgac
gaggacgatgctaagtcgaccgtatctgcaaaaccgggacagagaaagcggaaactgagc
ggaagcacagatgcagccagtacaaaagccccatccaaatatcgagctggaggcaccggt
atccatcgacctgttaaagcacccaaaaccaatgaggatttcggcgccgactatcgatcg
cggaaggccaaaggcgatgtcaagaaaaagggcaaaccagatccgttcgcatatgtgcct
ttaactcgagctgctctcaataaaaggaaaaagatgaagagcgctggtagattcaaaaac
attatatctggagcgaagaaaggagctcgtatcggtagcaaaggaaagcgaaaattatat
tag
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integrated database retrieval system