Venturia canescens: 122407213
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Entry
122407213 CDS
T09386
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
vcan
Venturia canescens
Pathway
vcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122407213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122407213
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122407213
mRNA degradation factors
5'-3' decay
Lsm complex
122407213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122407213
NCBI-ProteinID:
XP_043269205
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Position
2:4130745..4132325
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AA seq
134 aa
AA seq
DB search
MDIVPGTASLLDELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHHTIERIHVGKEYGDIP
RGVFIIRGENVVLLGEIDRDKEKDLPLSEVSVDDILDAQRREQELKQDQERLMNKALKER
GLSYIPDLGHDDMF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggatattgttccaggaacagcctctctacttgacgagctagataaaaaactcatggtt
ttgttgagagatggcagaactctgattggatatctgaggagtgttgatcaatttgcgaac
ttggttcttcatcatacgatagaaaggattcatgttggaaaagaatatggagacattcca
agaggggtattcatcattcgcggtgaaaatgtggtccttttaggtgaaattgacagggac
aaagagaaagacctgccattgtccgaggtttcagtcgacgatattttggatgctcagaga
cgagaacaagagcttaagcaagatcaagaacgattgatgaacaaagctctgaaagagcga
ggtctgtcttacattccggatcttggccacgatgacatgttttga
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