Venturia canescens: 122407256
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Entry
122407256 CDS
T09386
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122407256
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
90S particles
Other 90S particles
122407256
Pre-60S particles
Other pre-60S particles
122407256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_SPT8
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
122407256
NCBI-ProteinID:
XP_043269292
LinkDB
All DBs
Position
1:3556036..3559279
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AA seq
488 aa
AA seq
DB search
MNVVPCVAWVKRGVAAAVPDKVQLTPKELEAIIKQTESELRDLEESDSENEDETPSKNNI
QTIEEANESKTNADGMTVDEYNFGNYDNEAGDVHCNIGGLAVYNGDGKDPFVTVADSEDE
DSEKEDDVIKPDDNLVLIGHVEGDASILEIFVYNEKEGSFYCHHDILLPSFPLCLEWLNF
DPSDAKPGNLCAMGNMTKVIDVWDLDLVDCLEPAFRLGRKKSDKGHKDAVLDIAWNTNYT
HVLASGSVDKSTMLWDMETQKRGTKLNSFTDRVQSIQFHPTEAHHLLTGCADSVVRLFDC
KVENESKNWTVSGEVERVLWNHFDPNYCFVSTSNGFVECIDIRQETILWQVSAHEKEITG
LSLSTSCPGLLLTASADGVVKVWDVIKPEVLEPVWEKKMNLGDIQCLAQSPDSPFIFAVG
GDNKANNFKVWDLLESPSVSERFKGRNLINCVKESKPEQTDVMEVADDMDGMALEASTSS
KIKKKGKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgtaccgtgtgtggcatgggttaagagaggcgtagcagctgcagttcctgac
aaagttcaattaactcctaaggaattggaagcaataatcaaacagacagaatctgaactt
agagatttggaggagagtgactcggaaaacgaagatgaaacaccatccaagaataacatt
caaaccatcgaggaagctaatgaatcgaaaaccaatgctgacggaatgactgttgatgag
tacaactttggaaactatgacaatgaagctggcgatgtgcactgtaacataggaggatta
gcagtttataacggagatggcaaagatccttttgtaactgtagcagacagcgaggatgaa
gattcggaaaaggaggacgatgtgatcaaacctgatgataatcttgtactcattggacat
gtcgaaggagacgccagtattttagagatatttgtctataacgaaaaagaaggttcgttt
tattgtcaccatgatattctcctaccttcatttcctctctgtctcgaatggctcaatttt
gatccgagcgatgcaaaacctgggaatttatgcgctatggggaatatgacaaaagtaatt
gatgtatgggatctcgatttggtggattgcctggaacctgctttcaggcttggtaggaaa
aagtctgataaaggtcacaaagacgctgttctcgatattgcttggaacacgaattatacg
cacgtattagcaagtggttcagttgacaaatcgacaatgctatgggatatggaaacgcag
aaacgagggacgaaattgaattcgtttacagatcgagtgcagagcatacaattccatcca
accgaagctcatcatctccttacgggttgtgccgacagtgtggtacgattgttcgactgc
aaagtggaaaatgaatcaaaaaattggacagtttcgggcgaagtggaacgcgtattgtgg
aatcattttgatccgaattattgtttcgtcagtacgagtaacggttttgtcgaatgtatc
gacatccgacaagaaacaatattgtggcaagtttcagcacatgaaaaagaaataacgggt
ttatctttgagcacgtcatgtcctggattattgttaacggcatcagctgacggagttgtt
aaagtgtgggacgtcattaaaccggaagtgcttgaacctgtatgggaaaagaagatgaac
ttgggtgacattcagtgcctcgcacagagtcctgacagtcctttcatcttcgcagttggt
ggtgacaacaaggcgaacaacttcaaagtttgggatcttcttgaatcaccttcagtgtcg
gaaagattcaagggcagaaatctcatcaattgtgtaaaagagtcaaaacctgaacaaacc
gatgttatggaagtagctgatgatatggacggaatggctttggaagctagcacatctagt
aaaattaagaaaaaaggaaagaagtga
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