Venturia canescens: 122407319
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Entry
122407319 CDS
T09386
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vcan
Venturia canescens
Pathway
vcan03020
RNA polymerase
vcan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122407319
09124 Replication and repair
03420 Nucleotide excision repair
122407319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122407319
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122407319
Enzymes [BR:
vcan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122407319
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122407319
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122407319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122407319
NCBI-ProteinID:
XP_043269385
LinkDB
All DBs
Position
2:complement(20140742..20146648)
Genome browser
AA seq
1179 aa
AA seq
DB search
MFVPEDEQYEEADSEEISSNLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
DSPQIDLQAEAQHTSGEIELPHRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTLVKDIGRDNEERLETQHQKTFIGKIPIMLRSKYCLLSQLADRDLTELNE
CPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLW
INMMAKSGASIKKSAIGQRIVAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPE
MMEMVKPSLDEAFVIQEQNVALNFIGTRGARPGVTRDRRVKYSREILQKEMLPHVGISDF
CETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVR
MYAQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFA
STLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGS
QPSPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDI
IVSEVSMIRDIRDREIRIYTDAGRISRPLLIVEGQKLLLKKRHIDVLKERDYNNDGWQEL
VSSGVVEYIDTLEEETVMIAMSPDDLNMKKDVAYCTTHTHCEIHPAMILGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAG
INSIVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAESKRIGDQEEQFEKPTRQ
TCQGMRNAIYDKLDDDGIIAPGIRVSGDDVVIGKTITLPETDDELDSTTKSFTKRDASTF
LRNSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMP
FSCEGLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLL
QEYGYQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPM
EGRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTF
ECKGCKNKTQISQIRLPYAAKLLFQELMAMNIAPRLMVV
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttccagaagatgaacaatacgaggaggcggatagcgaagaaatatcctcgaat
ttatggcaagaagcatgttggatcgtcataaatgcttatttcgatgagaaaggtttggta
cggcaacaactcgacagttttgatgaattcattgaaatgtcagttcaacgtattgtggaa
gattcgccccaaatcgatctccaggccgaagctcaacatacttctggagaaatcgaactt
ccccatcgtcatctactgaagtttgaacagatttatttatctaaacccacacactgggaa
aaagacggtgcaccttctcccatgatgcccaatgaagcacgattacgaaacctcacttat
tcagcaccactttatgttgatatcacaaaaactctcgtcaaggatattggtagagataat
gaagaaagattggaaactcaacaccaaaaaacttttattggaaaaattccaatcatgttg
agatcaaagtattgcttactatcacagttggctgatcgtgatttgactgaattgaatgag
tgtcccctggatcctggaggatattttataataaacggatctgagaaagtactaattgct
caagaaaaaatggcgacaaatacagtttacgttttcagtatgaaagatggaaagtacgca
tataaagcagagattcgttcttgcttggagcacagttccagaccaacgtccactttgtgg
atcaacatgatggccaaaagtggcgcaagcataaaaaaatcagcgataggtcaaagaatc
gtggcgatattaccgtacataaagcaagaaataccgataatgatagttttccgagcactg
ggtttcgtcgccgatcgtgatatattggagcacataatctacgatttcgacgatcccgaa
atgatggaaatggtaaaaccatcgttggacgaggcgtttgtaatacaggaacagaacgtc
gcattgaatttcatcggtactcgtggtgcgaggccaggtgtaacgagagatcgtcgtgtc
aaatattcccgtgaaatattacagaaggaaatgttgcctcatgtgggaataagtgatttt
tgtgagacgaaaaaggcgtatttcttgggttacatggtgcacagattattatcagcatca
ttgggtcgaagggagctcgatgatcgggatcattacggcaacaagcgtctggatcttgca
gggccgttgctcgcttttctgtttcgaggattgtttaaaaatctcatgaaagaagttcgg
atgtacgcgcaaaaattcatcgatcgcgggaaagatttcaacttggaactcgctataaaa
actaaaataataacagacggtcttcgttattcgttggcgacgggcaattggggagatcag
aaaaaagcgcatcaggcgagagccggtgtgtcgcaagtattgaatcgattgactttcgcc
tcgaccctgtcgcatcttaggagagtcaattcaccgataggtcgcgatggaaaattagca
aaacctcgacagcttcacaatacgttatggggcatgctttgtcccgctgaaacacccgaa
ggcgcggctgtcggtctcgtcaaaaacctcgctcttatggcatacataagcgttggctct
cagccttcgccgattctcgagttcttggaggaatggtcgatggaaaatctggaagaaata
gcgcctagtgctatagcagatgcgaccaaaatatttgtcaatggttgttgggtcggaatc
catcgtgatcccgatcaattaatggcaactcttagaaaactacgcagacagatggatata
atcgtttctgaagtttccatgataagagatattcgtgatcgcgaaattagaatttatacc
gatgccggaagaatcagtaggcctcttcttatcgtcgagggacaaaaactattactcaaa
aaacgtcacatcgatgtcctcaaagaacgagactacaacaacgacggatggcaggaattg
gtcagcagcggtgtcgtggaatatatcgatactctcgaagaggaaactgtcatgattgct
atgtcaccagatgacttgaacatgaaaaaagatgtagcctactgtaccactcacactcac
tgcgaaattcatccggcgatgattctcggtgtatgcgcctctatcatacctttccctgat
cacaatcagagccccagaaacacttatcaaagcgctatgggtaaacaagccatgggagtt
tacattacgaatttccacgttagaatggacactctggctcacgtactttattatccccac
aaaccactcgtaacaactagatcgatggagtatctcaggtttcgagaattgccagctgga
ataaacagcattgtagcaattctttgctacacgggatataatcaggaggacagtgttatt
ctcaacgcgagcgccgtcgaaagaggtttcttccgatcggtgttttatcgatcttacaaa
gacgccgagtccaaaagaatcggtgatcaagaggaacaattcgagaaaccaacgagacaa
acgtgccaaggaatgcgcaatgccatttacgacaaacttgatgacgatggtatcattgca
cccggtattcgtgtgtccggcgatgatgttgtcattggaaaaacaatcacactcccggaa
accgacgatgagttggacagcacgacaaagagcttcacgaaacgagacgcttcgacattt
ttgcgtaacagtgaaactggcatcgttgatcaagttatgctaacgttgaacagtgaaggt
tacaaattttgcaaaattcgtgtccggagcgttcgaatacctcaaatcggtgacaaattt
gcatcgcgtcatggacagaagggaacgtgtggtattcagtacagacaagaagacatgcct
ttctcgtgcgagggtctcactcccgatatcataatcaatcctcatgctattccatcccgt
atgacgatcggccatttaatcgaatgtattcagggcaaagtatcggccaataagggagaa
atcggtgacgcgactccttttaacgatgctgtaaacgtacaaaaaatttcgacacttctt
caagaatacggttatcaattgagaggcaacgaagttatgtacaacgggcacaccggacga
aaaatcaatgcccaagtctttttgggtcctacttattatcagcgtttgaagcatatggtt
gatgacaaaattcacagtcgagcaagaggacccgtacaaattctcgtcaggcaaccgatg
gaaggcagagccagagacggtggtcttcggttcggtgaaatggaacgtgattgtcaaata
tctcatggagcagcccaattcctgcgcgaacgtcttttcgaagtatccgatccttaccgt
attcacatctgcaatttttgcggtcttatagctatagcaaatctacgtaacaatacgttc
gaatgcaaagggtgtaaaaacaaaactcaaatatcgcagataagattgccatacgcggcg
aaactacttttccaagaacttatggcgatgaacattgcaccaaggctcatggtagtctga
DBGET
integrated database retrieval system
