Venturia canescens: 122407619
Help
Entry
122407619 CDS
T09386
Name
(RefSeq) patched domain-containing protein 3 isoform X1
KO
K24682
patched domain-containing protein
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vcan04990
]
122407619
Domain-containing proteins not elsewhere classified [BR:
vcan04990
]
Other domain-containing proteins
Patched domain-containing proteins
122407619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
122407619
NCBI-ProteinID:
XP_043269885
LinkDB
All DBs
Position
3:13235841..13268760
Genome browser
AA seq
1045 aa
AA seq
DB search
MWCRLTCVDEFLNRSFYKLGLVVGRHPGYFLIIPVLLACICITGYQRIHYEIDPEYLFSP
INGPGKTERAIAEEHFKVNYSYYFNVGRITRPGRFGHVIVIPKDGDKNMLRTAIWEELKL
LDEIIRNATATYEGESFTYEKVCARWFGECFLNDILNLHHVIDEVESRELNLTFPVMLNP
VTWDAHLFPVYFGGSVITEDLTIDTVPAVQLAYFIAADNKRQDAIGAAWEEAFLNNVGKA
EDEGLFQHISTARFASRTLELELEANTKTVVPYFSSTFAIMGIFSIVTCMMTDWVRSKPW
LGLLGNVSAGLATVSAFGLCMYLGVDFIGLNLAAPFLMIGIGIDDTFVMLAAWRRTNIMK
LVPERMAVTLSEAAVSITITSLTDMISFFIGIISPFPSVQIFCIYSGFAVVFTFLFHLTF
FSACVAISGYCEQSNRHSVVCCKVQPLSKSAHRSWLYRVLCTGGVDPDDPTNPVDNPEHG
CMTWFRDYLAAALNCRSVKCLVILVFGLYLTGAMYGLTTLQEGLDRRKLSKEDSYSITFY
DREDFYFREFPYRIQVIVSGQYDYSDPLIQEQMENLTSSLESTVYISTPIYTESWLRSFL
SYMKRNDEYLNATISTETSFIETLKDVWLFPKSTFSLDVKFDKSEQHIVASRFLIQAVNI
SGTNQEKEMVKELRRLCAESPLNATVFHPYFVFFDQFELVRPTSIQCMIFGALIMMLISF
IFIPNVLCSLWVAFCIVSIELGVAGYMALWDVNLDSISMINLIMCIGFSVDFTAHICYAY
MSSKEKRPEDRVKECLYSLGLPIVQGAASTILGLVALILAGTYIFLVFFKMVFLVIFIGA
LHGLLLLPVLLSIFGPGSCSSSDDNEEEKESKKRKLEDRKVSKLPVPYVIPHPTLLYHQP
IAAKSLETSPAISLAVLEDRDPGLGTSEDSNSTESGSSQSRRRQQSQESNEDAVQKRRYE
DWRRSVGMLPSMSQFQAGPAPPPDYPGAANQETPQNFDTRAFRSVPYPGYLGYQENPSRD
FRRNRSQHNLHQPSPARYLTDPRYP
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtagactcacgtgcgtcgacgagttcctcaatcgcagcttctacaaactcggc
ctcgtagtcggacgacatcccggctattttctcatcattccagtcctcttagcgtgcatt
tgcattaccggatatcagagaattcattatgaaattgatcccgaatatctcttctcgccg
atcaacggaccaggcaaaaccgaacgtgccatcgccgaggaacacttcaaagtcaattac
agctattatttcaatgtcggcagaatcacgaggccaggtcgattcggtcacgtaatcgtg
ataccgaaggatggcgacaagaacatgctacgaactgccatctgggaggaactgaaactc
ctggacgagatcattagaaacgccacggcgacttatgagggcgagagcttcacttacgag
aaagtttgtgctcgatggttcggcgagtgttttttgaatgacattctcaatctgcatcat
gtcatcgatgaggttgagagtcgagaactgaatttgacgtttccggtaatgttgaatccg
gtaacgtgggatgcgcacttgtttccggtttattttggcgggagtgtgataaccgaggat
ctgacgatcgacacggtgcccgcggtccaattggcttacttcatagcagcggacaacaag
cgccaagatgccattggcgctgcttgggaagaagcgttcctcaataacgttggaaaagcc
gaggacgaaggactttttcaacacataagtacagcgaggttcgcttcgaggactctcgag
ctcgaactcgaggctaatacgaaaaccgtcgtgccttacttttcaagtacctttgcgata
atgggaatattctcgatcgtcacttgtatgatgaccgactgggtccgcagcaaaccgtgg
ctcggacttctcggcaatgtttcggctgggctggcgaccgtctcagctttcggactctgc
atgtaccttggcgtcgattttatcggcctcaatctcgctgctcccttcctcatgattgga
atcgggatcgacgatacttttgtcatgctcgctgcgtggcgacgaacgaacataatgaaa
ctcgtgcctgagaggatggcagtcacgttgagcgaagctgcggtttcgataacgataacg
tcattaactgacatgatatccttcttcattggcatcatttcaccgtttccttccgtccaa
atattctgcatatattcaggattcgctgtcgttttcacattcctattccatttgactttc
ttcagcgcctgcgtggccataagcggttactgtgagcaaagtaatcgtcacagtgtcgtt
tgctgcaaagttcaaccgctctcgaagtccgctcatcgatcatggttgtatcgagttttg
tgcaccggtggagtggatccggacgatccaacgaatccagttgacaatcccgagcacggt
tgcatgacatggttccgcgattatttggcagcggccttgaattgtcgttccgtgaagtgt
ctcgtcattctggttttcggactttatttgacaggagcaatgtacggtcttacaactctc
caggaaggtcttgacagacgcaaattgtcgaaggaggattcctactcgatcactttttac
gatcgcgaagatttttattttcgcgaattcccatacaggatccaggtgatcgtcagtggg
caatacgactacagcgaccctttgatccaagagcaaatggagaatttaacatcgagtttg
gagtcaacggtgtacataagtacgccaatatacacagaaagttggctgcggagttttctg
agttacatgaaaaggaacgacgagtatttgaacgcgacgataagcacggaaacaagtttc
atagagacattgaaggatgtgtggctctttccaaaaagtacattctcgctggacgtgaaa
ttcgacaagtccgaacagcacatagttgcgagtagatttttaattcaagctgtgaacata
agtggaacaaatcaggagaaagaaatggtgaaagagttgcgtcgtttgtgtgcggagtca
ccgttgaacgcgacagtttttcatccctatttcgtgttcttcgaccaattcgagctcgtc
aggccaacgagtatacagtgcatgattttcggggcgctaataatgatgctcatttcgttt
atcttcataccaaacgttttgtgcagtttgtgggtggctttttgcatagtttcgatagaa
ctaggagtcgcgggttacatggcactttgggatgttaatttggacagcatatcgatgatc
aatctgataatgtgcatcggcttcagcgtcgacttcaccgcccacatatgttacgcatac
atgagttcgaaagagaagcggccggaagatcgtgtgaaggaatgtctttacagtttggga
ttaccaatcgtgcagggtgcagcttcgacgatactgggtctggttgctttgatcctggca
ggcacttacatctttttggttttctttaaaatggtgttcctcgtgatattcattggtgct
ctccacgggttgctcctccttccggttctactatcaatattcggtcccggatcttgttcg
agtagtgacgataacgaagaagagaaagagtcgaagaaacgcaagctggaagatcgaaaa
gtttcgaaactgccggtcccctacgtgattccgcacccaacgctcctttaccatcaaccc
atcgcagccaaatctcttgaaacaagtccagccatcagtttagctgtcctcgaagataga
gatcctggcctagggaccagtgaagatagcaattccaccgagagtggatcttcccaaagc
cgaaggcgtcaacaaagccaggagagcaacgaagatgctgtgcaaaaaagacgatacgaa
gattggcgaagatccgtcggtatgctgcccagcatgtcacaatttcaagctggaccagca
cctcctcccgactaccctggtgctgcgaaccaagaaactccccaaaactttgatacgagg
gcattcagatctgttccctaccctggttaccttggctatcaagaaaatccctccagggat
ttcagacgcaatcgatcacagcataacctacatcaaccatcgccagccagatatctcact
gatcctaggtacccttaa
DBGET
integrated database retrieval system
