KEGG   Venturia canescens: 122408051
Entry
122408051         CDS       T09386                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
vcan  Venturia canescens
Pathway
vcan03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122408051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcan03400]
    122408051
Enzymes [BR:vcan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122408051
DNA repair and recombination proteins [BR:vcan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122408051
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase BRCT_2 Spectrin_5
Other DBs
NCBI-GeneID: 122408051
NCBI-ProteinID: XP_043270527
LinkDB
Position
3:10733469..10782975
AA seq 959 aa
MSDQEEETEKPFAVERAKTGRAKCKKCKCPIDKDVIRIAKLMSNPFGDGKMKAWHHLTCI
FDVFAKQRATTKRIENPSEDVSGWDDLDDDGRKSVIEKLEEFENNAPFKTATKKQTMKKA
VRAQSPSNLGPPTKVAKLSPKDSLPSTSKKNLSNDKKLDVKKAIDSSANDKTTRDHAFRE
FRRLCADLSNASAYTEKTAIVKRRLTMGANTDGFQGDLFLWCKLLLPGAVKRIYNLQSKQ
LVKLFARLFRQNEDEMLENLEQGDVAETIKIFFEKSTAVTPSSQSLLTLQEVDEFLEELT
QLTKEDDQAQHFRSLISRCTPNDLKMIIRLIKRDLRINAGPKHILEAVHPDAYKAYQVSN
DLGAVIERCVNVDSSTGASTSIKDSPKNAGKNATISLSLMTPVLPMLAEPCKSVDMAMKK
CPNGMLSEVKYDGERVQVHKKGTEFRYFSRSLKPVLPHKIKLFKDYIPEAFPDGDDLILD
SEILMIDTNTGQPLPFGSLGKHKKEEFKDANVCLFVFDCLYYNGDVLMNKPMKERRRILK
NTMTIIPNRIMLSEVQEVHDPKDLAQMIAQVLKMGLEGLVLKDINSLYEPGMRHWLKVKK
DYLFDGAMADSADLVVLGAWYGTGNKGGMMSVFLMGCYDDDTKQWVTVTKVHGGHDDATL
ARLQDELDMIKIGKDHNLVPNWLRVNRPMVPDFIARDPQKSPVWEITGAEFTNQGVHTAD
SISIRFPRVTKIRDDKCWRTATSLKELRVLFDKSASSIDFSLLLGDAQDKQDKKPSSLDT
FLQPSTSGIPRSPSPSPLKKIKDESPSDDEDDFNGRPRRKAVGLFSSVHYDESSDSDPSE
DESVPQSDGIFSDVRISLSRDLGEFKRKALRQTLKANGARILRRQALSEATHVIHNSNAV
SATVLLDRSGVPKTARHVNYSWVERSAAESKMLDVSPHAVKLLGDYCECPCSHGPRGVQ
NT seq 2880 nt   +upstreamnt  +downstreamnt
atgtccgatcaagaagaagagacggaaaagccattcgccgttgagagggcgaaaactggt
cgtgcgaaatgtaaaaagtgcaagtgtccgatcgataaagatgtgatcaggatcgcaaag
ctcatgagcaatccatttggcgatggtaaaatgaaggcttggcatcatttaacgtgtatt
tttgatgtattcgccaaacaacgcgccacaacgaagaggattgaaaatccatccgaggat
gtcagcggttgggacgacctcgacgacgatggaagaaaaagtgttatcgagaaattagaa
gagttcgaaaacaacgccccgttcaaaactgcaacgaagaaacaaacaatgaagaaagct
gtgagagctcaaagtccatcgaatctaggccctccgacaaaagtcgctaaactcagcccc
aaggattctctcccatcaactagtaaaaaaaatctttcgaatgacaagaagctggatgtg
aaaaaagcgatcgattcatcggcgaacgacaaaacaacgagagaccatgccttccgtgag
tttcgtcgcttgtgcgccgacttatcgaatgccagcgcgtatacagaaaaaactgcaatt
gtcaagagaagactaaccatgggagccaacaccgatggcttccaaggtgatctttttctg
tggtgcaaacttttgttgcccggagccgtcaagagaatttataatctccagagcaaacaa
ttggtcaaattattcgcacgattgttccggcagaatgaagacgaaatgttggagaatctg
gagcagggtgacgtcgctgaaaccattaaaattttcttcgaaaaaagtacggcggtgact
ccaagttcccagagtcttcttacccttcaagaggtagatgaatttttggaggaactaact
caactcacgaaagaggatgaccaggctcaacactttcgatcacttattagcagatgcaca
cctaatgacctgaagatgataataagattgatcaagcgagacctgcgaatcaacgccggc
cctaaacacatactcgaggcggttcatccagatgcttacaaggcctaccaagtctcgaat
gaccttggcgctgtgatagaacgttgtgtaaatgtcgattcgtcaactggagcgtctacg
tcgattaaggattctccaaaaaatgctggaaagaacgccactatatcgctgtcactgatg
acaccggttttacccatgctggcagaaccgtgtaaatcagttgatatggctatgaaaaaa
tgtcccaatggcatgttgtccgaggtgaagtacgatggagaaagagtacaagtgcacaaa
aaaggaaccgagtttcgatacttcagcagatccctcaaaccagtgctgccacataagatc
aaattgttcaaagactatatacccgaagcttttcctgacggcgatgaccttattctggat
agtgaaatactcatgatcgacacaaacaccggccaaccattgccatttggatccttagga
aaacacaagaaagaagaatttaaagatgccaacgtttgtctgttcgtcttcgactgtttg
tattataacggtgatgtcctcatgaacaagcccatgaaggagcgcagaagaattctgaaa
aacacaatgaccatcattccaaaccgaataatgctttcagaagtccaagaagttcacgat
ccgaaggatctggctcagatgattgcccaggtattgaaaatgggcctcgaaggattagtt
ctcaaagatataaacagtttgtacgagcccgggatgcgacattggttgaaggtgaagaag
gattacttgttcgatggggcaatggcggatagcgcagatctcgttgttctcggtgcttgg
tatggtaccggaaataaaggtggaatgatgtccgttttcctcatgggatgttatgatgat
gacactaaacagtgggttacggtaaccaaggttcacggtggccacgacgatgcaacttta
gcgagacttcaggacgaactggacatgataaaaattggcaaagatcataatctcgtgcca
aactggctgagagtaaacaggccaatggtaccggatttcatagctcgcgatccgcagaag
tcacccgtttgggaaataactggagctgaatttacgaaccaaggtgttcacacagcggac
agcatcagcataagatttccacgagtgacgaagattcgtgatgataaatgttggcgaaca
gcaacttcattgaaggaacttcgagttctatttgataagagcgcatcgtcgatcgacttc
tctttgttgctgggtgatgcgcaggacaaacaagacaaaaaaccatcgtcgctggatact
tttttgcagccaagtacgagtgggattccaaggtcaccatctccgagcccgctcaaaaaa
atcaaggacgaaagtccatccgacgatgaagatgacttcaacggacgtcctaggagaaaa
gccgttggccttttctcctctgtacactacgatgagtcgtcggattctgacccaagtgag
gatgaatcggtaccgcaaagcgatggaattttttctgacgttcggatcagcctgagtcgt
gacctcggcgagttcaaacggaaagctcttcgacaaacgttaaaagctaacggtgctaga
atcctaaggcgtcaagcgttgtccgaagcgacccacgttatacacaacagtaacgcagtg
tcagcaaccgttttactcgatcgttctggtgtaccgaaaacagcaagacacgtgaattat
tcgtgggtcgagcgttctgcagctgaatcaaagatgttggatgtttcaccgcacgctgtg
aaactgctcggagactattgcgaatgtccctgttctcatggacctcgtggtgtccaataa

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