Venturia canescens: 122408146 Help Entry 122408146         CDS       T09386                                  Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism vcan  Venturia canescens Pathway vcan03040   Spliceosome Brite KEGG Orthology (KO) [BR:vcan00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     122408146  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:vcan03041]     122408146 Spliceosome [BR:vcan03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     122408146  Complex C    U5 SnRNP specific factors     122408146 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 HAT_PRP39_N TPR_19 TPR_16 TPR_17 Suf HAT_Syf1_CNRKL1_N TPR_2 HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_8 TPR_1 TPR_11 TPR_6 TPR_15 ARM_TT21_2nd ARM_TT21_N TPR_9 Iml2-TPR_39 TPR_CcmH_CycH FAT TPR_MalT ChAPs TPR_21 NatA_aux_su Ribosomal_60s Motif Other DBs NCBI-GeneID:  122408146 NCBI-ProteinID:  XP_043270713 LinkDB All DBs Position 3:9864086..9869013 Genome browser AA seq 932 aa AA seqDB search MAVPSASLSTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT KRAKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK EYREKRLREELERYRQERPKIQQQFSDLKRELVNVSEDDWKNVPEVGDARNRKQRNPRAE KFTPLPDSVLARNLGGETATSLDPSSGLASMMPGSSTPGGMLTPTGDLDLRKIGQARNTL MNVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPP AWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPDTAKAVIAQSVRHIP TSVRIWIKAADLESEIKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECC PTSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRA ISSLSANGVEINREHWFKEAMEAEKAGAVHCCQVIVKSIIGFGVEEEDRKHTWMEDAETC AQQGALECARAVYAYAQTAFPSKKSIWLRAAYFEKTYGTRESLETLLQRAVAHCPKSEVL WLMGAKSKWLAGDVPAARGILSLAFEANPNSEEIWLAAVKLESENSEYERARRLLAKARA SAPTPRVMMKSAKLEWALNNLEAALRLLKEAIEAFDDFPKLWLMKGQIEEQQGNLDAALD TYNQAIKKCPTSVPLWRLLASLEHRKNQVTKARSVLEKARLRNPKNPQLWLEAIRNELKI GGVRDMANTLMAKALQECPTSGLLWAEAIFMEPRPQRKTKSVDALKKCEHDPHVLLAVSK LFWCEHKISKCRDWFNRTVKIDPDLGDAWAYFYKFELLNGTEEQQEDVKKRCVAAEPHHG EHWCKISKNIVNWCLSIDQILIMVAKDLPIPI NT seq 2799 nt NT seq  +upstreamnt  +downstreamnt atggcggtcccctcggcttcgctgtcaacaaggaacaaaaaacattttttgggagtaccg gctcctttaggttacgtggctggtgttggaagaggtgcaacaggattcacaacacgttct gacatcggtccggcccgtgacgccaacgacgtatccgatgacagacacgctccaccgaca aaacgagcaaagaaaaaagaggaggaagaagaagatgaggaagatctcaacgactcgaat tatgacgagttctctggatacggcggttctctgttcagcaaggatccatacgacaaagac gacgaagaggcagatgcaatttacgaggcgatagataaacgaatggacgaaaaacgaaaa gaatacagagagaaacgtttgcgagaagaattggaacgctatcgtcaagagcggccaaaa atacaacagcaattctcggatttgaagagagaattggtaaacgtaagtgaggacgattgg aagaatgtgccggaagtgggtgacgcgagaaatcgaaagcagagaaatccacgagctgaa aagttcactcccttgcccgattctgttctcgcgagaaatttgggtggcgaaaccgcgacg agtctcgatccgtcgagtggtttggcttccatgatgcccggatcttccacacccggtggc atgcttacacccaccggtgatctcgatttacgaaaaatcggacaagccagaaacactctg atgaacgttaagttgaatcaagtctcggattcggtcgaaggccaaaccgtcgtcgatcct aagggttaccttaccgatcttcagagtatgatcccaacttacgggggtgatatcaacgac ataaaaaaggctcgactgctactgaaatcggttcgagaaacgaacccgaatcatcctcca gcttggatagcttctgctcgactcgaggaagtaaccggcaaggtccaggctgcaaggaat ttgataatgaaaggttgcgaagtaaatccgacttcagaggatctttggctcgaagcagca agactccagcctccggacacagcaaaagcagtgatcgcccaatcagttagacacataccg acctctgtcagaatttggatcaaggcggcggatctcgagagtgaaattaaggcgaaaaga cgagtttacagaaaagctttggagcacataccgaattcggtgagactttggaaagcagcg gtcgaattggaggagcccgaggatgctcggattttattgagtcgagccgtcgaatgttgc ccgacgagcgtcgatctgtggctcgccctcgcccgtctcgagacttacgacaacgctcgt aaagtcctcaacaaagcaagagaaaatattcccaccgaccggcaaatttggacaacagcc gcaaagctcgaagaggccaatggcaacaaacacatggtcgaaaaaataatcgatcgtgct atttcttcattgagcgcaaacggcgttgaaattaatcgcgagcactggttcaaggaagcg atggaagctgaaaaagctggcgccgttcactgctgtcaagttatcgtgaaatccatcatt gggttcggcgtcgaagaagaagaccggaaacacacgtggatggaagacgcagaaacatgc gcccaacaaggagctttggaatgcgccagagcggtttacgcctacgctcaaacagcgttc ccaagcaaaaaatctatttggttacgagctgcctatttcgaaaaaacttacggcacccga gagtctctcgaaacgcttcttcaaagggccgttgctcattgtcccaagagcgaggtcctt tggcttatgggagccaaatccaagtggttggcgggcgacgtcccagccgcgcgaggcatc ctttcgctagctttcgaggcaaatccaaactccgaagagatttggctcgccgcagtgaaa ctcgagtcggaaaattcggaatacgagcgagctcgacgcttgttggcgaaagcacgagcc tctgctccgacccccagggtcatgatgaagagcgctaaactcgagtgggctctgaacaac ctcgaagcggcgcttcgactattgaaagaggcgatcgaagcgtttgacgattttccaaaa ttgtggctcatgaagggccagattgaggaacagcagggcaatcttgacgctgctctcgat acgtataatcaagcgatcaaaaagtgtccgacttccgtgccattgtggaggttgttggcg agtctggagcacagaaaaaatcaagtgacaaaggcccgttcagttctggagaaggcccgt ctacgaaatccaaagaatcctcaactttggttggaggcgatacgaaacgagttgaaaatc ggtggtgtccgagacatggcgaacacgctcatggcgaaagctcttcaagagtgtccgacc tcgggtttgctgtgggctgaggcaatcttcatggagcctcggccacaacgaaaaacgaag agcgtcgacgctctgaaaaaatgtgaacacgatcctcacgttcttctcgcagtatcaaaa cttttctggtgtgagcataaaatctcgaagtgccgagattggttcaacagaacagtgaaa atcgatccggatttaggagacgcttgggcatatttttacaaatttgaactcctcaatggt accgaggaacaacaggaagacgtcaaaaagaggtgcgtcgctgctgagccccatcatggc gaacactggtgcaaaatctccaagaacatagtcaattggtgtcttagcatcgatcagata ttgatcatggtcgccaaagatttgcccattcctatataa

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