Venturia canescens: 122408277
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Entry
122408277 CDS
T09386
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
vcan
Venturia canescens
Pathway
vcan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122408277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122408277
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122408277
Prokaryotic type
Archaeal type
TFB
122408277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
BING4CT
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
122408277
NCBI-ProteinID:
XP_043270907
LinkDB
All DBs
Position
3:8113371..8117059
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AA seq
340 aa
AA seq
DB search
MLKSIGVRMCQAWNKKWECFVAITCIKEHKRHDTNKVCCYAHPEAHLIEDYRAGDQICSE
CGLVVGDRVIDVGSEWRTFSNEKAGVDPSRVGGPENPLLNGSDLSTMIGPGTGAASFDAF
GASKYQNRRTMNSSDRALVNAFREITGMADRINLPKTIVDRANILFKQVHDGKNLKGRAN
DAISSACLYIACRQEGVPRTFKEICAISKISKKEIGRCFKLILKALETSVDLITTGDFMS
RFCSNLGLPNMVQRAATHIARKAVEIDIVPGRSPISVAAAAIYMASQASEDKRSQKEIGD
IAGVADVTIRQSYKLMYPHAIKLFPEDFAFATPIDQLPQM
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtccataggtgtgcgtatgtgtcaagcgtggaataaaaaatgggaatgtttt
gtcgcgataacctgtatcaaggaacataagaggcacgataccaataaagtttgctgctac
gctcatccggaagcacatttgatagaggattacagagcgggtgaccagatttgttcagag
tgtggattagtcgtgggggacagagtcatcgatgttggatcagaatggcgaacatttagc
aatgagaaagcaggtgttgatccttctcgagtgggaggcccagaaaatccacttctcaat
ggctctgatttatctactatgattggcccaggaacaggagcagcttcttttgatgctttt
ggcgcatccaagtatcaaaacagacgcacaatgaacagttccgacagagccttggttaat
gcgttccgtgaaataactgggatggccgatcgtataaacttgccaaaaacaatcgtcgat
cgggcaaacatattgttcaaacaggtacacgacgggaaaaacttgaaaggacgggcaaac
gatgcgatatcgtccgcttgtctctacatagcatgccgtcaagagggcgtacctcgaacc
ttcaaagaaatttgtgcaatcagtaaaatcagtaaaaaagaaatcggccgatgtttcaaa
ctgatactcaaggctctcgaaacgagtgttgacctcatcacgactggcgactttatgtca
cgtttttgctcaaatttgggcctacctaatatggtacagagagccgccactcacattgca
agaaaagccgtcgagattgatatcgtacctggcagatctccgatttccgtagctgctgca
gctatttatatggcttcacaggcttcggaagacaaaagatcgcagaaagagatcggtgat
attgctggtgtagcagatgtcacgatcagacaatcatacaaactgatgtatccacacgcc
atcaagcttttccctgaagacttcgcctttgcaacacccatcgatcagttgccgcagatg
taa
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